RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 LAMTOR5O43504 91 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 CD2BP2O95400 341 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 NPTXRO95502 500 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 EDN1P05305 212 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 CNPP09543 421 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 NAMPTP43490 491 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 SCNN1GP51170 649 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 PTGDRQ13258 359 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 PPM1JQ5JR12 505 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 HAUS3Q68CZ6 603 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 C15orf39Q6ZRI6 1047 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 STAMQ92783 540 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 EMILIN2Q9BXX0 1053 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 CHST7Q9NS84 486 aa11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 NOL7Q9UMY1 257 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 SMG5Q9UPR3 1016 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-203ENST00000534830 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 ARHGEF35A5YM69 484 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 F8W810 466 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 LAD1O00515 517 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 ACKR2O00590 384 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 KCNA4P22459 653 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 AKAP5P24588 427 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 CCT6AP40227 531 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 PRPHP41219 470 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 OR1G1P47890 313 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 DSG1Q02413 1049 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 CSTF1Q05048 431 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 DMWDQ09019 674 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 NAB2Q15742 525 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 GPR65Q8IYL9 337 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 ST13P5Q8NFI4 369 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 RPS6KC1Q96S38 1066 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 MYADMQ96S97 322 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 MMTAG2Q9BU76 263 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 TRIM6Q9C030 488 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 C2orf40Q9H1Z8 148 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 MRPL17Q9NRX2 175 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 EPS15L1Q9UBC2 864 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 LRWD1Q9UFC0 647 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 PCDHGA2Q9Y5H1 932 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 DOCK8Q8NF50 2099 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 DOCK6Q96HP0 2047 aa11.11□□□□□ -0.63
CLSTN3-203ENST00000534830 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 N4BP3O15049 544 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 C1RP00736 705 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 MYBP10242 640 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 GRIK3Q13003 919 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 MAPK6Q16659 721 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 ZNF528Q3MIS6 628 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 HACE1Q8IYU2 909 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 SHDQ96IW2 340 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 APOL6Q9BWW8 343 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 RHOBTB2Q9BYZ6 727 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 CXCL16Q9H2A7 254 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 BHMT2Q9H2M3 363 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 MAN1C1Q9NR34 630 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 SSX2IPQ9Y2D8 614 aa11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 PRG3Q9Y2Y8 225 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-203ENST00000534830 CLUHO75153 1309 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 CITO14578 2027 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PDCD11Q14690 1871 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PTGESO14684 152 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 TEX28O15482 410 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PRKCBP05771 671 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 STARD6P59095 220 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PRPF4BQ13523 1007 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 UBXN2BQ14CS0 331 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PPP2R5AQ15172 486 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 HYIQ5T013 277 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 FUT10Q6P4F1 479 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 KCNK18Q7Z418 384 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 DAW1Q8N136 415 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 CMASQ8NFW8 434 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms