RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 PROM2Q8N271 834 aa9.34□□□□□ -0.91
CTNND1-237ENST00000534579 FAM129AQ9BZQ8 928 aa9.34□□□□□ -0.91
CTNND1-237ENST00000534579 DNAJC12Q9UKB3 198 aa9.34□□□□□ -0.91
CTNND1-237ENST00000534579 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
CTNND1-237ENST00000534579 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
CTNND1-237ENST00000534579 ZMYND10O75800 440 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 GGPS1O95749 300 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SRGNP10124 158 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 CETPP11597 493 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 CYP2B6P20813 491 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 YWHABP31946 246 aaKnown RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 GUCY2DQ02846 1103 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 TRPV6Q9H1D0 765 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 INTS9Q9NV88 658 aaKnown RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGEF9O43307 516 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 FTCDO95954 541 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 AKT1P31749 480 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 GCKP35557 465 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 TMED1Q13445 227 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SPATA2LQ8IUW3 424 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGEF28Q8N1W1 1705 aaKnown RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PRRG1O14668 218 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PSMA3P25788 255 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 HAUS6Q7Z4H7 955 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SAAL1Q96ER3 474 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 CCDC90BQ9GZT6 254 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SMARCAD1Q9H4L7 1026 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 OLFML3Q9NRN5 406 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 H0YC42 278 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PNMA6AP0CW24 399 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 KCNA2P16389 499 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 AARSP49588 968 aaKnown RBP eCLIP9.33□□□□□ -0.923e-6■□□□□ 10.9
CTNND1-237ENST00000534579 AP1B1Q10567 949 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 C11orf96Q7Z7L8 435 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 KIF2CQ99661 725 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PARD6BQ9BYG5 372 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ING2Q9H160 280 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SNX5Q9Y5X3 404 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 EPB42P16452 691 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 CCT5P48643 541 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ACAD11Q709F0 780 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-237ENST00000534579 SPATA16Q9BXB7 569 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 PCDHA13Q9Y5I0 950 aa9.33□□□□□ -0.92
CTNND1-237ENST00000534579 GYS2P54840 703 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 NCALDP61601 193 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 FBXW10Q5XX13 1052 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 RFWD2Q8NHY2 731 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 TUFT1Q9NNX1 390 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 MED4Q9NPJ6 270 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 WARS2Q9UGM6 360 aaKnown RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 SH3BP1Q9Y3L3 701 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 SLIT1O75093 1534 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 TADA2AO75478 443 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 VAMP7P51809 220 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ANGPT1Q15389 498 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 DDIASQ8IXT1 998 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 C10orf53Q8N6V4 93 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 RNF149Q8NC42 400 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 BCAS4Q8TDM0 211 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 FBXO41Q8TF61 875 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PYROXD1Q8WU10 500 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■■■■■ 50.8
CTNND1-237ENST00000534579 FRMD3A2A2Y4 597 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 NR3C2P08235 984 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PRAMEP78395 509 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGAP15Q53QZ3 475 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 CATSPER3Q86XQ3 398 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 GPRC5AQ8NFJ5 357 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ASNSD1Q9NWL6 643 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 TMEM161AQ9NX61 479 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 AIPL1Q9NZN9 384 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 EXOC1LA0A1B0GW35 172 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 M0QYV0 167 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 SRGAP2O75044 1071 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 NDUFA10O95299 355 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 EYA4O95677 639 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PLTPP55058 493 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ANTXR2P58335 489 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 LRRC74AQ0VAA2 488 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 KCNH2Q12809 1159 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGEF7Q14155 803 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 TMEM270Q6UE05 265 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 NT5DC4Q86YG4 428 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms