RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 TTPALQ9BTX7 342 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-228ENST00000534373 ZDHHC7Q9NXF8 308 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 CASTOR2A6NHX0 329 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 H0YCG3 227 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 TGM5O43548 720 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 PLA2G4BP0C869 781 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 MCF2P10911 925 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 PLS3P13797 630 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 PROZP22891 400 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 SP100P23497 879 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-228ENST00000534373 UBA7P41226 1012 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 SLC12A3P55017 1021 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 STRN3Q13033 797 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 ZRSR1Q15695 479 aaKnown RBP14.7□□□□□ -0.06
CAPN1-228ENST00000534373 TMEM119Q4V9L6 283 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 FAM171A1Q5VUB5 890 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 DCLRE1AQ6PJP8 1040 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
CAPN1-228ENST00000534373 FBXL6Q8N531 539 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 STAMQ92783 540 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 ASIC4Q96FT7 647 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 WDR6Q9NNW5 1121 aaKnown RBP14.7□□□□□ -0.06
CAPN1-228ENST00000534373 SLC38A7Q9NVC3 462 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 LARSQ9P2J5 1176 aaKnown RBP14.7□□□□□ -0.06
CAPN1-228ENST00000534373 LIMD1Q9UGP4 676 aa14.7□□□□□ -0.06
CAPN1-228ENST00000534373 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 SFI1A8K8P3 1242 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 TRAPPC3O43617 180 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 TOM1L1O75674 476 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 KIF4AO95239 1232 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 LONP1P36776 959 aaKnown RBP14.69□□□□□ -0.06
CAPN1-228ENST00000534373 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 RTP2Q5QGT7 225 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 TAS1R3Q7RTX0 852 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 PALB2Q86YC2 1186 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 LNX1Q8TBB1 728 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-228ENST00000534373 RABGGTAQ92696 567 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 DDX27Q96GQ7 796 aaKnown RBP14.69□□□□□ -0.06
CAPN1-228ENST00000534373 B3GALT6Q96L58 329 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 TARS2Q9BW92 718 aaKnown RBP14.69□□□□□ -0.06
CAPN1-228ENST00000534373 CDT1Q9H211 546 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
CAPN1-228ENST00000534373 SLC16A4O15374 487 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 B3GAT3O94766 335 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 NUBP1P53384 320 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 UPP1Q16831 310 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-228ENST00000534373 RTL10Q7L3V2 364 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 TMEM161BQ8NDZ6 487 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 CLSTN3Q9BQT9 956 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 PRKD2Q9BZL6 878 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 CXCL16Q9H2A7 254 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 CACNG4Q9UBN1 327 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 MYO10Q9HD67 2058 aa14.68□□□□□ -0.06
CAPN1-228ENST00000534373 ABLIM1O14639 778 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 MAPTP10636 758 aaKnown RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 KCNE1P15382 129 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 FGFR3P22607 806 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 RPL9P32969 192 aaKnown RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 ABCD1P33897 745 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 CLCNKBP51801 687 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 PSMD5Q16401 504 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 UVSSAQ2YD98 709 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 ARSHQ5FYA8 562 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 HASPINQ8TF76 798 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 SMG7Q92540 1137 aaKnown RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 NXPE3Q969Y0 559 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 ZNF707Q96C28 371 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 INTS4Q96HW7 963 aaKnown RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 PLIN2Q99541 437 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 IGSF9Q9P2J2 1179 aa14.67□□□□□ -0.06
CAPN1-228ENST00000534373 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-228ENST00000534373 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
CAPN1-228ENST00000534373 ZNF318Q5VUA4 2279 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 CLDN3O15551 220 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 RFPL2O75678 378 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 ZMYND10O75800 440 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 HNRNPA1P09651 372 aaKnown RBP eCLIP14.66□□□□□ -0.06
CAPN1-228ENST00000534373 SPATA31D3P0C874 917 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 RPL17P18621 184 aaKnown RBP14.66□□□□□ -0.06
CAPN1-228ENST00000534373 HOXA9P31269 272 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 NCKAP1LP55160 1127 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 RAD51AP2Q09MP3 1159 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 TDGQ13569 410 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 RAB33AQ14088 237 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
CAPN1-228ENST00000534373 KYAT1Q16773 422 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 GLRA4Q5JXX5 417 aa14.66□□□□□ -0.06
CAPN1-228ENST00000534373 SPATA31D4Q6ZUB0 917 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms