RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TAOK3Q9H2K8 898 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 COL20A1Q9P218 1284 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 ATP8B3O60423 1300 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 NFIBO00712 420 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 AGTP01019 485 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 GH1P01241 217 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 PYGLP06737 847 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 LMBRD2Q68DH5 695 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-226ENST00000533820 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.67■□□□□ 0.9
CAPN1-226ENST00000533820 DRG2P55039 364 aaKnown RBP20.67■□□□□ 0.9
CAPN1-226ENST00000533820 TRAF1Q13077 416 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 HERPUD2Q9BSE4 406 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 WNT8AQ9H1J5 351 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 ANAPC7Q9UJX3 599 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 TMEM120BA0PK00 339 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 SORBS3O60504 671 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 CNGA2Q16280 664 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 NUGGCQ68CJ6 796 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 CCDC63Q8NA47 563 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 TAS1R2Q8TE23 839 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 FAM210AQ96ND0 272 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 AGAP1Q9UPQ3 857 aa20.67■□□□□ 0.9
CAPN1-226ENST00000533820 MRPL11Q9Y3B7 192 aaKnown RBP20.67■□□□□ 0.9
CAPN1-226ENST00000533820 RARGP13631 454 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 CYP11B1P15538 503 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 RARRES1P49788 294 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 DGKZQ13574 1117 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 UGCGQ16739 394 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 KIF2BQ8N4N8 673 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 PAIP2Q9BPZ3 127 aaKnown RBP20.66■□□□□ 0.9
CAPN1-226ENST00000533820 ADAM33Q9BZ11 813 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 KDM4CQ9H3R0 1056 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 PICK1Q9NRD5 415 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 PPIP5K2O43314 1243 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 CHRNA5P30532 468 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 ELF3P78545 371 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-226ENST00000533820 SPP2Q13103 211 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 SIX1Q15475 284 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-226ENST00000533820 TRPM8Q7Z2W7 1104 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 SLC9A9Q8IVB4 645 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 CCDC50Q8IVM0 306 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 CPA5Q8WXQ8 436 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 ART4Q93070 314 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 CENPTQ96BT3 561 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 RPS6KC1Q96S38 1066 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 MXRA8Q9BRK3 442 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 STRA6Q9BX79 667 aa20.66■□□□□ 0.9
CAPN1-226ENST00000533820 O00370 1275 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 UBOX5O94941 541 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 MYCLP12524 364 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 SP4Q02446 784 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 SLMAPQ14BN4 828 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 SNRNP35Q16560 246 aaKnown RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 LACTB2Q53H82 288 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 HP1BP3Q5SSJ5 553 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 TRIM74Q86UV6 250 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 TRIM73Q86UV7 250 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 COL23A1Q86Y22 540 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 FAM71AQ8IYT1 594 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 CD101Q93033 1021 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 PARP2Q9UGN5 583 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 CCPG1Q9ULG6 757 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 UBE4BO95155 1302 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 HSPA6P17066 643 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 EIF2AK2P19525 551 aaKnown RBP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 MASTLQ96GX5 879 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.65■□□□□ 0.9
CAPN1-226ENST00000533820 SCN9AQ15858 1988 aa20.65■□□□□ 0.9
CAPN1-226ENST00000533820 PDE6CP51160 858 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 XRCC4Q13426 336 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 ACCSLQ4AC99 568 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 CC2D2BQ6DHV5 1058 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 PIGWQ7Z7B1 504 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 AAASQ9NRG9 546 aa20.64■□□□□ 0.9
CAPN1-226ENST00000533820 PLS3P13797 630 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 MAPK4P31152 587 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 KCNJ2P63252 427 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 TBC1D25Q3MII6 688 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 XKR9Q5GH70 373 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 MRRFQ96E11 262 aaKnown RBP20.64■□□□□ 0.89
CAPN1-226ENST00000533820 YIPF3Q9GZM5 350 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 R3HDM2Q9Y2K5 976 aaKnown RBP20.64■□□□□ 0.89
CAPN1-226ENST00000533820 L3MBTL1Q9Y468 752 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 P4HBP07237 508 aaKnown RBP20.64■□□□□ 0.89
CAPN1-226ENST00000533820 ADSSP30520 456 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 ADCY8P40145 1251 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 MFAP3P55082 362 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 C9orf72Q96LT7 481 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 EHMT1Q9H9B1 1298 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 TCEAL9Q9UHQ7 104 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 TMX2Q9Y320 296 aa20.64■□□□□ 0.89
CAPN1-226ENST00000533820 ALAS1P13196 640 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 YWHABP31946 246 aaKnown RBP20.63■□□□□ 0.89
CAPN1-226ENST00000533820 ITGA8P53708 1063 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 CAPN12Q6ZSI9 719 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 TAOK1Q7L7X3 1001 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 NOD2Q9HC29 1040 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms