RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PJA2O43164 708 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 PHF2O75151 1096 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 CFIP05156 583 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 SNRPA1P09661 255 aaKnown RBP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 EGR2P11161 476 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 MYCLP1P12525 358 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 CLRN1P58418 232 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 BLOC1S1P78537 153 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 MPP3Q13368 585 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 MST1LQ2TV78 715 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 AGAP9Q5VTM2 703 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 ZKSCAN2Q63HK3 967 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 BOLLQ8N9W6 283 aaKnown RBP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 CLRN3Q8NCR9 226 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 SIMC1Q8NDZ2 872 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 UHRF1Q96T88 793 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-205ENST00000533776 ZSWIM1Q9BR11 485 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 KLHL11Q9NVR0 708 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 COX11Q9Y6N1 276 aa4.23□□□□□ -1.73
BRCA2-205ENST00000533776 SETD1BQ9UPS6 1966 aaKnown RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 WNT10BO00744 389 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 NEMP1O14524 444 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ESRRBO95718 433 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 FOSP01100 380 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ELANEP08246 267 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 BPIP17213 487 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 FSCN1Q16658 493 aaKnown RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 SPDYE7PQ495Y7 208 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 TSHZ3Q63HK5 1081 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 MED25Q71SY5 747 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ZNF572Q7Z3I7 529 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 KIAA0907Q7Z7F0 614 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 GPR149Q86SP6 731 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 MAPKAPK5Q8IW41 473 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 RHOT2Q8IXI1 618 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 OR7D4Q8NG98 312 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 RNF31Q96EP0 1072 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ALOXE3Q9BYJ1 711 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 QRSL1Q9H0R6 528 aaKnown RBP4.22□□□□□ -1.73
BRCA2-205ENST00000533776 NOX1Q9Y5S8 564 aa4.22□□□□□ -1.73
BRCA2-205ENST00000533776 ULK1O75385 1050 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 RAP2AP10114 183 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 ENPP1P22413 925 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 FDXRP22570 491 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 ECHS1P30084 290 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 MPLP40238 635 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 SESN3P58005 492 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 SCAPQ12770 1279 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 RRP12Q5JTH9 1297 aaKnown RBP4.21□□□□□ -1.74
BRCA2-205ENST00000533776 COLEC12Q5KU26 742 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 AFMIDQ63HM1 303 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 B3GNTL1Q67FW5 361 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-205ENST00000533776 ARMC6Q6NXE6 501 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 Q6ZVL8 140 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 TMEM132CQ8N3T6 1108 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 GPR156Q8NFN8 814 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 TSPEARQ8WU66 669 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 TGFBRAP1Q8WUH2 860 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 AUTS2Q8WXX7 1259 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 RAX2Q96IS3 184 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 Q96MF0 132 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 ACAP3Q96P50 834 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 IFT22Q9H7X7 185 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 BCO1Q9HAY6 547 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 TLK1Q9UKI8 766 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 MAPRE3Q9UPY8 281 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 PNPLA7Q6ZV29 1317 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 SALL3Q9BXA9 1300 aa4.21□□□□□ -1.74
BRCA2-205ENST00000533776 AATKQ6ZMQ8 1374 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 ALOX15P16050 662 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-205ENST00000533776 PER3P56645 1201 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 OCA2Q04671 838 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 SP140Q13342 867 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 DHCR24Q15392 516 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 SP5Q6BEB4 398 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-205ENST00000533776 CMIPQ8IY22 773 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 DRC7Q8IY82 874 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 PQLC1Q8N2U9 271 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 CAGE1Q8TC20 777 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 FUBP3Q96I24 572 aaKnown RBP eCLIP4.2□□□□□ -1.74
BRCA2-205ENST00000533776 TTC1Q99614 292 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 MRI1Q9BV20 369 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 REXO4Q9GZR2 422 aaKnown RBP4.2□□□□□ -1.74
BRCA2-205ENST00000533776 LDAHQ9H6V9 325 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 KIAA1586Q9HCI6 787 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 DMRT3Q9NQL9 472 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 APOBEC2Q9Y235 224 aaKnown RBP4.2□□□□□ -1.74
BRCA2-205ENST00000533776 MAST3O60307 1309 aa4.2□□□□□ -1.74
BRCA2-205ENST00000533776 ATRNL1Q5VV63 1379 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 A0A1B0GTW7 788 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 CCDC78A2IDD5 438 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 ONECUT2O95948 504 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 ATP5JP18859 108 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 FGFR4P22455 802 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 SREBF1P36956 1147 aa4.19□□□□□ -1.74
BRCA2-205ENST00000533776 ELLP55199 621 aaPredicted RBP4.19□□□□□ -1.74
BRCA2-205ENST00000533776 MRPS9P82933 396 aaKnown RBP4.19□□□□□ -1.74
BRCA2-205ENST00000533776 STRN3Q13033 797 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms