RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 CCDC112Q8NEF3 446 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 WNT8BQ93098 351 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 EEF2KMTQ96G04 330 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 CELF4Q9BZC1 486 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 PRMT7Q9NVM4 692 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 GINS2Q9Y248 185 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 TIMP1P01033 207 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 CTSHP09668 335 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 LORP23490 312 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.513e-8■■■□□ 19
CCDC90B-218ENST00000533761 RGS19P49795 217 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 GPC3P51654 580 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 KIZQ2M2Z5 673 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 TCERG1LQ5VWI1 586 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 LRRC8DQ7L1W4 858 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 KSR1Q8IVT5 923 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 USP38Q8NB14 1042 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 GCOM2Q9BZD3 368 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 TRPV2Q9Y5S1 764 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 CDY2AQ9Y6F7 541 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 ADGRA3Q8IWK6 1321 aa11.89□□□□□ -0.51
CCDC90B-218ENST00000533761 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 INO80B-WBP1J3KQ70 363 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 CLDN3O15551 220 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 GPR32O75388 356 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 TOM1L1O75674 476 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 AKAP3O75969 853 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 ERLIN2O94905 339 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 CHRNA1P02708 482 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 AFPP02771 609 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 PRKCBP05771 671 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 IQCF3P0C7M6 154 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 PTENP60484 403 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 KYAT1Q16773 422 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 DCAF17Q5H9S7 520 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 CCDC186Q7Z3E2 898 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 GPD1LQ8N335 351 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 CCDC51Q96ER9 411 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 ERGIC2Q96RQ1 377 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 DAAM1Q9Y4D1 1078 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 A0A087WZ62 844 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 ACKR2O00590 384 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 CYP2C18P33260 490 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 BFSP1Q12934 665 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 PRPF4BQ13523 1007 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 SNRNP35Q16560 246 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 MFSD5Q6N075 450 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 FMNL3Q8IVF7 1028 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 TMEM199Q8N511 208 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 OSMRQ99650 979 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 FDXACB1Q9BRP7 624 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 TCHPQ9BT92 498 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 IFT122Q9HBG6 1241 aa11.88□□□□□ -0.51
CCDC90B-218ENST00000533761 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 AKR1B15C9JRZ8 316 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 P4HA2O15460 535 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 EXTL3O43909 919 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 DARSP14868 501 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 RFC2P35250 354 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 PBX1P40424 430 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 CCL23P55773 120 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 MGAT3Q09327 533 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 FAM187BQ17R55 369 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 FAM43BQ6ZT52 329 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 LBHD1Q9BQE6 289 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 ADPGKQ9BRR6 497 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 CBWD1Q9BRT8 395 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 CCDC113Q9H0I3 377 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 INTS13Q9NVM9 706 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 ANKFY1Q9P2R3 1169 aa11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 AGO2Q9UKV8 859 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-218ENST00000533761 STYXL1Q9Y6J8 313 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms