RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.6
RPUSD4-207ENST00000532800 PIK3R5Q8WYR1 880 aa18.83■□□□□ 0.6
RPUSD4-207ENST00000532800 LAMP2P13473 410 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 MUTP22033 750 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 RBM25P49756 843 aaKnown RBP18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 NTHL1P78549 312 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 GNL2Q13823 731 aaKnown RBP18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 DCAF4L1Q3SXM0 396 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 GRASPQ7Z6J2 395 aaPredicted RBP18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 CCDC105Q8IYK2 499 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 IFT74Q96LB3 600 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 DDX19AQ9NUU7 478 aaKnown RBP18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 CA14Q9ULX7 337 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 KIAA1024Q9UPX6 916 aa18.82■□□□□ 0.6
RPUSD4-207ENST00000532800 MYH15Q9Y2K3 1946 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 PRR23AA6NEV1 266 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 EIF5BO60841 1220 aaKnown RBP18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 C8AP07357 584 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 SRFP11831 508 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 HMGN5P82970 282 aaKnown RBP18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 HTR4Q13639 388 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 ATF7IP2Q5U623 682 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 FRMD5Q7Z6J6 570 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 FAM184AQ8NB25 1140 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 KIFAP3Q92845 792 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 GOLGA2P5Q9HBQ8 144 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 WNT16Q9UBV4 365 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 LRWD1Q9UFC0 647 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 NUMBLQ9Y6R0 609 aa18.81■□□□□ 0.6
RPUSD4-207ENST00000532800 PP2D1A8MPX8 630 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 ANHXE9PGG2 379 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 CCL16O15467 120 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 FSHRP23945 695 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 TOB1P50616 345 aaPredicted RBP18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 EFNA5P52803 228 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 LIN9Q5TKA1 542 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 CEP120Q8N960 986 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 DTWD2Q8NBA8 298 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 GPR152Q8TDT2 470 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 SNX29Q8TEQ0 813 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 NXPE3Q969Y0 559 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 PPP1R10Q96QC0 940 aaKnown RBP18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 KIF2CQ99661 725 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 RTP3Q9BQQ7 232 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 NOL7Q9UMY1 257 aaKnown RBP18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 PCDHB6Q9Y5E3 794 aa18.8■□□□□ 0.6
RPUSD4-207ENST00000532800 STK25O00506 426 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 CLCNKBP51801 687 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 ELAVL2Q12926 359 aaKnown RBP18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 PTGDRQ13258 359 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 ANGPT1Q15389 498 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 PPM1LQ5SGD2 360 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 DAW1Q8N136 415 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 C3orf58Q8NDZ4 430 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 RPP25Q9BUL9 199 aaKnown RBP18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 TBC1D17Q9HA65 648 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 NOTCH4Q99466 2003 aa18.79■□□□□ 0.6
RPUSD4-207ENST00000532800 PTPRZ1P23471 2315 aaPredicted RBP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 E9PMD0 336 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 TMEM189-UBE2V1I3L0A0 370 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 I3L4J1 428 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 B3GAT3O94766 335 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 HNRNPA1P09651 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 FGFR3P22607 806 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 PEX3P56589 373 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 RSPO2Q6UXX9 243 aaPredicted RBP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 TAS1R3Q7RTX0 852 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 SLC7A14Q8TBB6 771 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 FGF14Q92915 247 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 CDT1Q9H211 546 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 TNFSF13BQ9Y275 285 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 COL4A3Q01955 1670 aa18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 RIF1Q5UIP0 2472 aaKnown RBP18.78■□□□□ 0.6
RPUSD4-207ENST00000532800 PHLPP2Q6ZVD8 1323 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 FAM186AA6NE01 2351 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 CCDC169A6NNP5 214 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 K7ERI5 159 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 RFX1P22670 979 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 TKTP29401 623 aaKnown RBP18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 CDC25AP30304 524 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 HOXA9P31269 272 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 OR1D2P34982 312 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 NPTX2P47972 431 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 OSTNP61366 133 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 SOX4Q06945 474 aaPredicted RBP18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 RAB33AQ14088 237 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 PDIA5Q14554 519 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 IL17AQ16552 155 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 UPP1Q16831 310 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms