RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 TOPORSQ9NS56 1045 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 KANSL3Q9P2N6 904 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CACNG4Q9UBN1 327 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 DNAJB4Q9UDY4 337 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TRANK1O15050 2925 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 LACTBL1A8MY62 500 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 PDXKO00764 312 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 INPPL1O15357 1258 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 FXR1P51114 621 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 RABGGTAQ92696 567 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 EEF2KMTQ96G04 330 aa12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-212ENST00000532708 KIAA1671Q9BY89 1806 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 NT5C1B-RDH14C9J2C7 533 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 EXTL3O43909 919 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 THP07101 528 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 PMS1P54277 932 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 WNT7BP56706 349 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 SNRPFP62306 86 aaKnown RBP12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 KYAT1Q16773 422 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 XKR4Q5GH76 650 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 Q7L0L9 218 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CBWD2Q8IUF1 395 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TMEM130Q8N3G9 435 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 NLRC5Q86WI3 1866 aa12.97□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TRIM49BA6NDI0 452 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 RFXAPO00287 272 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 EXOC3O60645 756 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 LDHAP00338 332 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 NR3C1P04150 777 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CTNNB1P35222 781 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 BMPR1AP36894 532 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 BCAR1P56945 870 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 ERVK-21P61565 698 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 GRIK3Q13003 919 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 STIM1Q13586 685 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 ZCWPW2Q504Y3 356 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 ANKRD40Q6AI12 368 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 XXYLT1Q8NBI6 393 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 C18orf25Q96B23 403 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 CGNQ9P2M7 1197 aaKnown RBP12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
TRAF3IP2-212ENST00000532708 EPOPA6NHQ4 379 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CASP4P49662 377 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NAB2Q15742 525 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KLHL40Q2TBA0 621 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 JADE1Q6IE81 842 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KCNT2Q6UVM3 1135 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 C12orf56Q8IXR9 622 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 COLGALT2Q8IYK4 626 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KIF12Q96FN5 646 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PPP1R10Q96QC0 940 aaKnown RBP12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PAAF1Q9BRP4 392 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DMAC2Q9NW81 257 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ANK1P16157 1881 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 F8W810 466 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PSMA7O14818 248 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KIAA0391O15091 583 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ADRB2P07550 413 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GALTP07902 379 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KCNE1P15382 129 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 LAG3P18627 525 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PTMSP20962 102 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NR2F2P24468 414 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 OR1G1P47890 313 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SLC11A1P49279 550 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 STX17P56962 302 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DSC1Q08554 894 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GRIN2CQ14957 1233 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DPCR1Q3MIW9 517 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms