RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 ACKR2O00590 384 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 C1RP00736 705 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 DCNP07585 359 aaKnown RBP16.74■□□□□ 0.27
BRPF3-210ENST00000532538 CYP11B2P19099 503 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 RPA1P27694 616 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 NAMPTP43490 491 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 NTHL1P78549 312 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 GLRA4Q5JXX5 417 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 FBXW11Q9UKB1 542 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 NOL7Q9UMY1 257 aaKnown RBP16.74■□□□□ 0.27
BRPF3-210ENST00000532538 SIT1Q9Y3P8 196 aa16.74■□□□□ 0.27
BRPF3-210ENST00000532538 ZFP37Q9Y6Q3 630 aaPredicted RBP16.74■□□□□ 0.27
BRPF3-210ENST00000532538 CCDC169A6NNP5 214 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 PTGESO14684 152 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 B3GAT3O94766 335 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 HNRNPA1P09651 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
BRPF3-210ENST00000532538 OR1D2P34982 312 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
BRPF3-210ENST00000532538 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
BRPF3-210ENST00000532538 SLC7A14Q8TBB6 771 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 SHDQ96IW2 340 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 KIFC3Q9BVG8 833 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
BRPF3-210ENST00000532538 K7ERI5 159 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 EFNA5P52803 228 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 HTR4Q13639 388 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
BRPF3-210ENST00000532538 ATF7IP2Q5U623 682 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
BRPF3-210ENST00000532538 MTSS1LQ765P7 747 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 BHMT2Q9H2M3 363 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 LRWD1Q9UFC0 647 aa16.72■□□□□ 0.27
BRPF3-210ENST00000532538 ZFHX2Q9C0A1 2572 aaPredicted RBP16.72■□□□□ 0.27
BRPF3-210ENST00000532538 TRAPPC3O43617 180 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 ELF1P32519 619 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 OSTNP61366 133 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 ZC3H14Q6PJT7 736 aaKnown RBP16.71■□□□□ 0.27
BRPF3-210ENST00000532538 PARM1Q6UWI2 310 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 KIFAP3Q92845 792 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 TCHPQ9BT92 498 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
BRPF3-210ENST00000532538 RAB34Q9BZG1 259 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 CXCL16Q9H2A7 254 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 LIMCH1Q9UPQ0 1083 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 KIAA1024Q9UPX6 916 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 R4GN57 208 aa16.71■□□□□ 0.27
BRPF3-210ENST00000532538 FAM186AA6NE01 2351 aa16.71■□□□□ 0.26
BRPF3-210ENST00000532538 ANHXE9PGG2 379 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 ADAM12O43184 909 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 LMNAP02545 664 aaKnown RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 ID4P47928 161 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 CLCNKBP51801 687 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 ARPP19P56211 112 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 GPC5P78333 572 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 ORC2Q13416 577 aaPredicted RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 UBXN2BQ14CS0 331 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 PABPC1LQ4VXU2 614 aaKnown RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 ING5Q8WYH8 240 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 FGF13Q92913 245 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 FGF14Q92915 247 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 UROC1Q96N76 676 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 RPP25Q9BUL9 199 aaKnown RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 FOXQ1Q9C009 403 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 SLC2A4RGQ9NR83 387 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 TOPORSQ9NS56 1045 aaPredicted RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 DDX19AQ9NUU7 478 aaKnown RBP16.7■□□□□ 0.26
BRPF3-210ENST00000532538 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
BRPF3-210ENST00000532538 NOTCH4Q99466 2003 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 I3L4J1 428 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 LRG1P02750 347 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 HARSP12081 509 aaKnown RBP16.69■□□□□ 0.26
BRPF3-210ENST00000532538 MUTP22033 750 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 TKTP29401 623 aaKnown RBP16.69■□□□□ 0.26
BRPF3-210ENST00000532538 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
BRPF3-210ENST00000532538 PEX3P56589 373 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 ZRSR1Q15695 479 aaKnown RBP16.69■□□□□ 0.26
BRPF3-210ENST00000532538 UVSSAQ2YD98 709 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 ZNF568Q3ZCX4 644 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 ITFG1Q8TB96 612 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 HCFC1R1Q9NWW0 138 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms