RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SLC28A3Q9HAS3 691 aa6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 AVENQ9NQS1 362 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 RAB6BQ9NRW1 208 aa6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 ANKEF1Q9NU02 776 aa6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 SUCLA2Q9P2R7 463 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 PADI3Q9ULW8 664 aa6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 TRIOBPQ9H2D6 2365 aa6.41□□□□□ -1.38
HMGB1P42-201ENST00000532126 RANBP2P49792 3224 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 A0A087WWV3 80 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RNF223E7ERA6 249 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 STX6O43752 255 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 PHACTR2O75167 634 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MED24O75448 989 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 DGAT1O75907 488 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GJB5O95377 273 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 BMP15O95972 392 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 CA3P07451 260 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MYOGP15173 224 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RPA1P27694 616 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GGCXP38435 758 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 CCT6AP40227 531 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RPIAP49247 311 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RARRES1P49788 294 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GPC3P51654 580 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 NFKB2Q00653 900 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GRIN2CQ14957 1233 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 EMC2Q15006 297 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TLR1Q15399 786 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 IL17AQ16552 155 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TM4SF20Q53R12 229 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 PLA2G2CQ5R387 149 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 SYCP2LQ5T4T6 812 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 KRT79Q5XKE5 535 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ARL6IP4Q66PJ3 421 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 PDE12Q6L8Q7 609 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 SPNS2Q8IVW8 549 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MYOCDQ8IZQ8 938 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MYO1HQ8N1T3 1032 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 IGSF22Q8N9C0 903 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 PIGOQ8TEQ8 1089 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TCP11Q8WWU5 503 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 PSPC1Q8WXF1 523 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM143Q96AN5 459 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF668Q96K58 619 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 NLRP4Q96MN2 994 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 RAD9AQ99638 391 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 GCOM2Q9BZD3 368 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 NKX2-4Q9H2Z4 354 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TTYH1Q9H313 450 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ADAMTS10Q9H324 1103 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 SEMA6BQ9H3T3 888 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZSCAN16Q9H4T2 348 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 SUV39H2Q9H5I1 410 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF576Q9H609 170 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ATP6V0A4Q9HBG4 840 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ERVK-5Q9HDB9 667 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ST7Q9NRC1 585 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MTMR10Q9NXD2 777 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 KLK14Q9P0G3 267 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 ST3GAL5Q9UNP4 418 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 MTMR6Q9Y217 621 aa6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
HMGB1P42-201ENST00000532126 TANC1Q9C0D5 1861 aa6.4□□□□□ -1.39
HMGB1P42-201ENST00000532126 A0A087WZ62 844 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 DENND3A2RUS2 1198 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ARHGEF35A5YM69 484 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 GOLGA6CA6NDK9 693 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 GOLGA6BA6NDN3 693 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 PP2D1A8MPX8 630 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ASAP2O43150 1006 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 GREM1O60565 184 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 UPP2O95045 317 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 GOLGA6DP0CG33 693 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 SRGAP2CP0DJJ0 459 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 MYCLP1P12525 358 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 DARSP14868 501 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 LIG1P18858 919 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 CD53P19397 219 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 MUTP22033 750 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 CDC25AP30304 524 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 RESTQ13127 1097 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 RAPGEF1Q13905 1077 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 MXD4Q14582 209 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZC3H12BQ5HYM0 836 aaKnown RBP6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 SNAP47Q5SQN1 464 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 PCGF5Q86SE9 256 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM228AQ86W67 206 aa6.39□□□□□ -1.39
HMGB1P42-201ENST00000532126 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms