RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 GALNT11Q8NCW6 608 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 GPRASP2Q96D09 838 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 SENP7Q9BQF6 1050 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 RC3H2Q9HBD1 1191 aaKnown RBP7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 C6orf50Q9HD87 102 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 MRPL42Q9Y6G3 142 aaKnown RBP7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 DNAH14Q0VDD8 3507 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 EVPLQ92817 2033 aa7.92□□□□□ -1.14
TRIM53CP-201ENST00000531490 MYH9P35579 1960 aaKnown RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 IGLV3-22A0A075B6J6 115 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ENPP3O14638 875 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 DEXIO95424 95 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 BRD1O95696 1058 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ITGB1P05556 798 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 RB1P06400 928 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 CYP3A4P08684 503 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 IBSPP21815 317 aaPredicted RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 GNA11P29992 359 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SREBF1P36956 1147 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 LPIN1Q14693 890 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 CBX2Q14781 532 aaPredicted RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ANKRD1Q15327 319 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 PAN2Q504Q3 1202 aaKnown RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 CEP55Q53EZ4 464 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 EARS2Q5JPH6 523 aaKnown RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 NKAPLQ5M9Q1 402 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 UTP14CQ5TAP6 766 aaKnown RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SMRP1Q8NCR6 262 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 NSUN7Q8NE18 718 aaKnown RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 VN1R2Q8NFZ6 395 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SPPL3Q8TCT6 385 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 WFDC12Q8WWY7 111 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 LINC01599Q8WXQ3 324 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 GTF3C6Q969F1 213 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 GJA10Q969M2 543 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ZBTB10Q96DT7 871 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 APOL5Q9BWW9 433 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 LMAN2LQ9H0V9 348 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 GLT8D2Q9H1C3 349 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SMOC2Q9H3U7 446 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SH3GLB2Q9NR46 395 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ORC3Q9UBD5 711 aaPredicted RBP7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 CDH22Q9UJ99 828 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 ADGRA3Q8IWK6 1321 aa7.91□□□□□ -1.14
TRIM53CP-201ENST00000531490 SIP14410 1827 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 PDE2AO00408 941 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 TM4SF5O14894 197 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 MAFGO15525 162 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 DHX15O43143 795 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 EIF5BO60841 1220 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 EDN3P14138 238 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 NOS3P29474 1203 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 TCF7P36402 384 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 ZNF76P36508 570 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 SIGLEC14Q08ET2 396 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 AP3B2Q13367 1082 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 CPLX2Q6PUV4 134 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 RTN4RL1Q86UN2 441 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 PLA2G4DQ86XP0 818 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 BLIDQ8IZY5 108 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 EFHBQ8N7U6 833 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 TMEM102Q8N9M5 508 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 LMBR1Q8WVP7 490 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 POF1BQ8WVV4 589 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 SEPT1Q8WYJ6 367 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 ZNF689Q96CS4 500 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 PCYT2Q99447 389 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 OSMRQ99650 979 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 PHF20Q9BVI0 1012 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 SSBP4Q9BWG4 385 aaPredicted RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 AGO3Q9H9G7 860 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 AGO4Q9HCK5 861 aaKnown RBP7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 PCDHA4Q9UN74 947 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 LIMCH1Q9UPQ0 1083 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 CACNA1GO43497 2377 aa7.9□□□□□ -1.14
TRIM53CP-201ENST00000531490 LOXHD1Q8IVV2 1947 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 DDX39AO00148 427 aaKnown RBP7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 NDUFB5O43674 189 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 DGKIO75912 1065 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 CCNE2O96020 404 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 CD52P31358 61 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 CIITAP33076 1130 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 ADAM17P78536 824 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 COASYQ13057 564 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 PRR16Q569H4 304 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 PEAR1Q5VY43 1037 aaPredicted RBP7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 CCDC83Q8IWF9 413 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 TBCKQ8TEA7 893 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 APBB2Q92870 758 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 NXPE3Q969Y0 559 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 LENG9Q96B70 501 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 CDHR1Q96JP9 859 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 FAM129BQ96TA1 746 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 PRRX2Q99811 253 aa7.89□□□□□ -1.15
TRIM53CP-201ENST00000531490 PHF7Q9BWX1 381 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms