RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 YARSP54577 528 aaKnown RBP20.67■□□□□ 0.9
SMPD1-205ENST00000531303 KCNH2Q12809 1159 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 SLC10A6Q3KNW5 377 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 MIIPQ5JXC2 388 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 PARD3BQ8TEW8 1205 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 APBB2Q92870 758 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 BADQ92934 168 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 SLC35C1Q96A29 364 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 A0A0U1RQF3 1178 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 LRRC10BA6NIK2 292 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 LRRIQ3A6PVS8 624 aaPredicted RBP20.66■□□□□ 0.9
SMPD1-205ENST00000531303 ENPP3O14638 875 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 TNNI1P19237 187 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 RAB27AP51159 221 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 C1orf220Q5T0J3 134 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 SLC24A5Q71RS6 500 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 ECHDC2Q86YB7 292 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 HACE1Q8IYU2 909 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 TMC2Q8TDI7 906 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 VWCEQ96DN2 955 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 CXCL16Q9H2A7 254 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 TSPYL2Q9H2G4 693 aaPredicted RBP20.66■□□□□ 0.9
SMPD1-205ENST00000531303 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
SMPD1-205ENST00000531303 C9IYK1 514 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 TEX33O43247 280 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 AFPP02771 609 aaKnown RBP20.65■□□□□ 0.9
SMPD1-205ENST00000531303 GCLMP48507 274 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 UBXN1Q04323 297 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 PPP2R3AQ06190 1150 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 PPP3CAQ08209 521 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 CNKSR3Q6P9H4 555 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 SARM1Q6SZW1 724 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 USP37Q86T82 979 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 PTPRJQ12913 1337 aa20.65■□□□□ 0.9
SMPD1-205ENST00000531303 MICAL3Q7RTP6 2002 aa20.64■□□□□ 0.9
SMPD1-205ENST00000531303 A0A1B0GTH6 734 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 LGALS16A8MUM7 142 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 CBFA2T2O43439 604 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 IL18RAPO95256 599 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 SKIP12755 728 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 TFAMQ00059 246 aaKnown RBP20.64■□□□□ 0.89
SMPD1-205ENST00000531303 IKBKEQ14164 716 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 RPUSD2Q8IZ73 545 aaKnown RBP20.64■□□□□ 0.89
SMPD1-205ENST00000531303 CGRRF1Q99675 332 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 TRAIPQ9BWF2 469 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 RTN4Q9NQC3 1192 aaKnown RBP20.64■□□□□ 0.89
SMPD1-205ENST00000531303 C1orf112Q9NSG2 853 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 INTS13Q9NVM9 706 aa20.64■□□□□ 0.89
SMPD1-205ENST00000531303 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 ZNF623O75123 536 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 ADCY5O95622 1261 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 NFICP08651 508 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 ATF7P17544 494 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-205ENST00000531303 ZNF75DP51815 510 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 NR1I3Q14994 352 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 GLRA4Q5JXX5 417 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 FKBP15Q5T1M5 1219 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 JADE1Q6IE81 842 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 AGMOQ6ZNB7 445 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 MRPL10Q7Z7H8 261 aaKnown RBP20.63■□□□□ 0.89
SMPD1-205ENST00000531303 ZNF516Q92618 1163 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 PGBD4Q96DM1 585 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 SNX27Q96L92 541 aa20.63■□□□□ 0.89
SMPD1-205ENST00000531303 FMO5P49326 533 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 FPGSQ05932 587 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 PPIGQ13427 754 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMPD1-205ENST00000531303 SURF1Q15526 300 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 CBWD6Q4V339 395 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 CBWD3Q5JTY5 395 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 CBWD5Q5RIA9 395 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 EFCAB13Q8IY85 973 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 OR5B17Q8NGF7 314 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 KIF12Q96FN5 646 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 ZFP42Q96MM3 310 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 GAD1Q99259 594 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 CRACR2AQ9BSW2 395 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 PLEKHA5Q9HAU0 1116 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 IL23AQ9NPF7 189 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 RALGAPA2Q2PPJ7 1873 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 TTC3P53804 2025 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-205ENST00000531303 STX10O60499 249 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 TPM3P06753 285 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 MLH1P40692 756 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 FAM189BP81408 668 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 BIRC3Q13489 604 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM132DQ14C87 1099 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM130Q8N3G9 435 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM117Q9H0C3 514 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 ASB7Q9H672 318 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 LRFN2Q9ULH4 789 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 INPP5FQ9Y2H2 1132 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 PCDHB7Q9Y5E2 793 aa20.62■□□□□ 0.89
SMPD1-205ENST00000531303 LTBP2Q14767 1821 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 TMEM191BP0C7N4 346 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 AFF1P51825 1210 aaKnown RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 MYL7Q01449 175 aa20.61■□□□□ 0.89
SMPD1-205ENST00000531303 POU5F1Q01860 360 aaKnown RBP20.61■□□□□ 0.89
SMPD1-205ENST00000531303 DUOXA2Q1HG44 320 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms