RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 GPRIN1Q7Z2K8 1008 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 CATIPQ7Z7H3 387 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 TTC7BQ86TV6 843 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 CHPFQ8IZ52 775 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 FBXO18Q8NFZ0 1043 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 IFI44Q8TCB0 444 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 ATXN2LQ8WWM7 1075 aaKnown RBP4.97□□□□□ -1.61
CD44-233ENST00000531141 KAT5Q92993 513 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 TMX3Q96JJ7 454 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 CPEB1Q9BZB8 566 aaKnown RBP4.97□□□□□ -1.61
CD44-233ENST00000531141 LDAHQ9H6V9 325 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 TSC22D4Q9Y3Q8 395 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
CD44-233ENST00000531141 MYBBP1AQ9BQG0 1328 aaKnown RBP4.97□□□□□ -1.61
CD44-233ENST00000531141 PRRG2O14669 202 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 SLC16A6O15403 523 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 HSPA6P17066 643 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 ATP5JP18859 108 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 PDCP20941 246 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 FPR1P21462 350 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 MGAT1P26572 445 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 PCSK1P29120 753 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 HIBADHP31937 336 aaKnown RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 IL12RB1P42701 662 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 CLRN1P58418 232 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 CRHR2Q13324 411 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 IFIT1BQ5T764 474 aaKnown RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 THEMIS2Q5TEJ8 643 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 C1QL3Q5VWW1 255 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 SPTY2D1Q68D10 685 aaPredicted RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 SEM1Q6ZVN7 128 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 PRRT2Q7Z6L0 340 aaPredicted RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 PLXDC1Q8IUK5 500 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 PALM2Q8IXS6 379 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 TCEAL8Q8IYN2 117 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 ZGPATQ8N5A5 531 aaKnown RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 TFAP2CQ92754 450 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 RGMAQ96B86 450 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 MAP3K14Q99558 947 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 GPR87Q9BY21 358 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 GTPBP4Q9BZE4 634 aaKnown RBP4.96□□□□□ -1.62
CD44-233ENST00000531141 SLC12A5Q9H2X9 1139 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 CALCOCO1Q9P1Z2 691 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 PCDHA13Q9Y5I0 950 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 ACTL7AQ9Y615 435 aa4.96□□□□□ -1.62
CD44-233ENST00000531141 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
CD44-233ENST00000531141 TBKBP1A7MCY6 615 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 B8ZZF3 427 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 ARIH2O95376 493 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 FXR1P51114 621 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD44-233ENST00000531141 CTXN1P60606 82 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 GTF2H3Q13889 308 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 CNGB1Q14028 1251 aaPredicted RBP4.95□□□□□ -1.62
CD44-233ENST00000531141 LRRC41Q15345 812 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 CDSNQ15517 529 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 VPS72Q15906 364 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 BMT2Q1RMZ1 405 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 PGS1Q32NB8 556 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 GADL1Q6ZQY3 521 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 Q6ZRM9 215 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 XYLT1Q86Y38 959 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 GSPT2Q8IYD1 628 aaKnown RBP4.95□□□□□ -1.62
CD44-233ENST00000531141 PRR18Q8N4B5 295 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 OR10H5Q8NGA6 315 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 HPS3Q969F9 1004 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 RAB24Q969Q5 203 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 MVB12AQ96EY5 273 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 MRGPRX4Q96LA9 322 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 MRI1Q9BV20 369 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
CD44-233ENST00000531141 C11orf54Q9H0W9 315 aaPredicted RBP4.95□□□□□ -1.62
CD44-233ENST00000531141 C1QTNF3-AMACRE9PGA6 284 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 TRIM24O15164 1050 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 ADRB1P08588 477 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 ALAS1P13196 640 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 HK1P19367 917 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 LPOP22079 712 aaPredicted RBP4.94□□□□□ -1.62
CD44-233ENST00000531141 SCNN1GP51170 649 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 CREMQ03060 361 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 TLE1Q04724 770 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 DACT2Q5SW24 774 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 ATXN7L2Q5T6C5 722 aaPredicted RBP4.94□□□□□ -1.62
CD44-233ENST00000531141 ANKS6Q68DC2 871 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 EFCAB12Q6NXP0 572 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 TPH2Q8IWU9 490 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 MAGEB6Q8N7X4 407 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 SLC35B2Q8TB61 432 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 CLPTM1LQ96KA5 538 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 MNTQ99583 582 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 KMT5AQ9NQR1 393 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 MAN1C1Q9NR34 630 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 POLHQ9Y253 713 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 RUVBL1Q9Y265 456 aaKnown RBP4.94□□□□□ -1.62
CD44-233ENST00000531141 PCDHB1Q9Y5F3 818 aa4.94□□□□□ -1.62
CD44-233ENST00000531141 WNT10BO00744 389 aa4.93□□□□□ -1.62
CD44-233ENST00000531141 FTLP02792 175 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms