RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 NSUN3Q9H649 340 aaKnown RBP12.97□□□□□ -0.33
LTBP3-219ENST00000530990 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
LTBP3-219ENST00000530990 EXOC7Q9UPT5 735 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 LZTS1Q9Y250 596 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
LTBP3-219ENST00000530990 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 OGTO15294 1046 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 EIF3DO15371 548 aaKnown RBP eCLIP12.96□□□□□ -0.33
LTBP3-219ENST00000530990 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
LTBP3-219ENST00000530990 MYL1P05976 194 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 THP07101 528 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ADSSP30520 456 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ERVFC1P60507 584 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 KRT17Q04695 432 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
LTBP3-219ENST00000530990 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 TCEAL5Q5H9L2 206 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ALKAL1Q6UXT8 129 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ADGRD2Q7Z7M1 963 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
LTBP3-219ENST00000530990 PPP1R10Q96QC0 940 aaKnown RBP12.96□□□□□ -0.33
LTBP3-219ENST00000530990 VN1R3Q9BXE9 311 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 SLC39A2Q9NP94 309 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 STYXL1Q9Y6J8 313 aa12.96□□□□□ -0.33
LTBP3-219ENST00000530990 UBE4BO95155 1302 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 FSCN2O14926 492 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 RPN1P04843 607 aaKnown RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 ALDH2P05091 517 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 CLTAP09496 248 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 HOXD13P35453 343 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 DPYDQ12882 1025 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 DDX53Q86TM3 631 aaKnown RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 KIAA0895Q8NCT3 520 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 TCF25Q9BQ70 676 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 ENTPD7Q9NQZ7 604 aa12.95□□□□□ -0.34
LTBP3-219ENST00000530990 PUF60Q9UHX1 559 aaKnown RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 CPSF3Q9UKF6 684 aaKnown RBP12.95□□□□□ -0.34
LTBP3-219ENST00000530990 PLXNA3P51805 1871 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 TTC26A0AVF1 554 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 NR1I2O75469 434 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 KIF4AO95239 1232 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 KCNE1P15382 129 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 ACOT2P49753 483 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 SPAG1Q07617 926 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
LTBP3-219ENST00000530990 POSTNQ15063 836 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
LTBP3-219ENST00000530990 KYAT1Q16773 422 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 ARMCX5Q6P1M9 558 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 ZNF507Q8TCN5 953 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 SAAL1Q96ER3 474 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 CBWD1Q9BRT8 395 aa12.94□□□□□ -0.34
LTBP3-219ENST00000530990 RPF1Q9H9Y2 349 aaKnown RBP12.94□□□□□ -0.34
LTBP3-219ENST00000530990 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
LTBP3-219ENST00000530990 TSC2P49815 1807 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 HIDE1A8MVS5 230 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 GARTP22102 1010 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 GTF2F1P35269 517 aaKnown RBP eCLIP12.93□□□□□ -0.34
LTBP3-219ENST00000530990 HYAL1Q12794 435 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 STK4Q13043 487 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 PNOCQ13519 176 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
LTBP3-219ENST00000530990 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 RNF168Q8IYW5 571 aaPredicted RBP12.93□□□□□ -0.34
LTBP3-219ENST00000530990 TMEM130Q8N3G9 435 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 MICAL1Q8TDZ2 1067 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 AUTS2Q8WXX7 1259 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms