RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 HERC4Q5GLZ8 1057 aaPredicted RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 MAP4K3Q8IVH8 894 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 MRPL43Q8N983 215 aaKnown RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 KCNN1Q92952 543 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 SNX27Q96L92 541 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 PPP1R10Q96QC0 940 aaKnown RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 CCDC94Q9BW85 323 aaPredicted RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 BLZF1Q9H2G9 400 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 FAM13BQ9NYF5 915 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 SERTAD1Q9UHV2 236 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 KCNG1Q9UIX4 513 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 ZMYM2Q9UBW7 1377 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.47■□□□□ 0.87
GMDS-208ENST00000530927 CLDN3O15551 220 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 PFKFB1P16118 471 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 SPAG1Q07617 926 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 COASYQ13057 564 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 TUSC3Q13454 348 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
GMDS-208ENST00000530927 ALKAL1Q6UXT8 129 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 EFHBQ8N7U6 833 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 STRA6Q9BX79 667 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 GPR62Q9BZJ7 368 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 TRIM9Q9C026 710 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 NGRNQ9NPE2 291 aaKnown RBP20.47■□□□□ 0.87
GMDS-208ENST00000530927 CLEC1BQ9P126 229 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 KCNH3Q9ULD8 1083 aa20.47■□□□□ 0.87
GMDS-208ENST00000530927 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 C2CD2LO14523 706 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 FAM189A1O60320 539 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 KIF4AO95239 1232 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 GCNT3O95395 438 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 EFEMP2O95967 443 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 PIGRP01833 764 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 CXCL8P10145 99 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 CTSAP10619 480 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 AFMP43652 599 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 NDUFV1P49821 464 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 PTPN14Q15678 1187 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 SLC10A6Q3KNW5 377 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 LEXMQ3ZCV2 418 aa20.46■□□□□ 0.87
GMDS-208ENST00000530927 APBB1IPQ7Z5R6 666 aaPredicted RBP20.46■□□□□ 0.87
GMDS-208ENST00000530927 C18orf25Q96B23 403 aaPredicted RBP20.46■□□□□ 0.87
GMDS-208ENST00000530927 IL9P15248 144 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 GAP43P17677 238 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 YARSP54577 528 aaKnown RBP20.45■□□□□ 0.86
GMDS-208ENST00000530927 ASIC1P78348 528 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 CUL4BQ13620 913 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 HSP90AA2PQ14568 343 aaPredicted RBP20.45■□□□□ 0.86
GMDS-208ENST00000530927 XKR4Q5GH76 650 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 ADALQ6DHV7 355 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 PDE12Q6L8Q7 609 aaKnown RBP20.45■□□□□ 0.86
GMDS-208ENST00000530927 RNF168Q8IYW5 571 aaPredicted RBP20.45■□□□□ 0.86
GMDS-208ENST00000530927 ZSWIM2Q8NEG5 633 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 GOLPH3LQ9H4A5 285 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 ST6GALNAC4Q9H4F1 302 aa20.45■□□□□ 0.86
GMDS-208ENST00000530927 A0A0B4J269 797 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 ACTN4O43707 911 aaKnown RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 CLASP2O75122 1294 aaKnown RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 PRPF6O94906 941 aaKnown RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 CLCNKBP51801 687 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 KCNC3Q14003 757 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 C3orf58Q8NDZ4 430 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 FEZF2Q8TBJ5 459 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 ADAMTS19Q8TE59 1207 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 PPP2R3CQ969Q6 453 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 MSTO1Q9BUK6 570 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 HERC2P3Q9BVR0 1158 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 COLEC11Q9BWP8 271 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 APOL5Q9BWW9 433 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 SEL1LQ9UBV2 794 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 ADAM28Q9UKQ2 775 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 CITO14578 2027 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 PDCD11Q14690 1871 aaKnown RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 DLL1O00548 723 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 LILRB3O75022 631 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 SOD2P04179 222 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 CMA1P23946 247 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 NDUFA8P51970 172 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 CD300LGQ6UXG3 332 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 MSLNLQ96KJ4 702 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 C7orf25Q9BPX7 421 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 OLFML3Q9NRN5 406 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 TOPORSQ9NS56 1045 aaPredicted RBP20.44■□□□□ 0.86
GMDS-208ENST00000530927 CNTN3Q9P232 1028 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 CDH22Q9UJ99 828 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 HPSEQ9Y251 543 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
GMDS-208ENST00000530927 I3L4J1 428 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 NR1I2O75469 434 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 TADA2AO75478 443 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 ADSSP30520 456 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 ACOT2P49753 483 aa20.43■□□□□ 0.86
GMDS-208ENST00000530927 ENOX2Q16206 610 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms