RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 BIRC8Q96P09 236 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CCT7Q99832 543 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 TCP11L1Q9NUJ3 509 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 HBS1LQ9Y450 684 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 TTLL3Q9Y4R7 772 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 TNS3Q68CZ2 1445 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 ARHGAP10A1A4S6 786 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 BOLA2-SMG1P6H3BVE0 249 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 PLEKHA8P1O95397 391 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 GAS8O95995 478 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 IGHMBP2P38935 993 aaKnown RBP8.65□□□□□ -1.02
CSDE1-214ENST00000530886 POLR2FP61218 127 aaKnown RBP8.65□□□□□ -1.02
CSDE1-214ENST00000530886 KLHL30Q0D2K2 578 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 ITGA7Q13683 1181 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 KIF22Q14807 665 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 TRMT5Q32P41 509 aaKnown RBP8.65□□□□□ -1.02
CSDE1-214ENST00000530886 DCAF12L1Q5VU92 463 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 BHMTQ93088 406 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 ISCA1Q9BUE6 129 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 GANQ9H2C0 597 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 CLIC5Q9NZA1 410 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 SCHIP1Q9P0W5 487 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-214ENST00000530886 THEGQ9P2T0 379 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 SNX24Q9Y343 169 aa8.65□□□□□ -1.02
CSDE1-214ENST00000530886 FAM47DPA6NHR8 397 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.03
CSDE1-214ENST00000530886 PHKG2P15735 406 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 FGFR4P22455 802 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 CHN2P52757 468 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 AP2B1P63010 937 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 NR1H3Q13133 447 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 MED21Q13503 144 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 LRRC8BQ6P9F7 803 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 SLC2A7Q6PXP3 512 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 PACS1Q6VY07 963 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 ZC3H3Q8IXZ2 948 aaKnown RBP8.65□□□□□ -1.03
CSDE1-214ENST00000530886 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 ALLCQ8N6M5 410 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 NSL1Q96IY1 281 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 BTBD9Q96Q07 612 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 ADAMTS1Q9UHI8 967 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 NAGPAQ9UK23 515 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 AMFRQ9UKV5 643 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 NR2E1Q9Y466 385 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 WASF2Q9Y6W5 498 aa8.65□□□□□ -1.03
CSDE1-214ENST00000530886 FKBP6O75344 327 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 FCER1AP12319 257 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 FGFR2P21802 821 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 KYNUQ16719 465 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 LONRF1Q17RB8 773 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 TRIM67Q6ZTA4 783 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 NLRP9Q7RTR0 991 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 IRF2BP2Q7Z5L9 587 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ANKLE2Q86XL3 938 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ANKRD42Q8N9B4 389 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 OR6Y1Q8NGX8 325 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 TRPC4APQ8TEL6 797 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 SLCO2A1Q92959 643 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 AK8Q96MA6 479 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 TRIM31Q9BZY9 425 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 KCNK9Q9NPC2 374 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 RIC8AQ9NPQ8 531 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 NDE1Q9NXR1 346 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 QPCTLQ9NXS2 382 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PADI4Q9UM07 663 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PP2D1A8MPX8 630 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 MAGEB3O15480 346 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 RARBP10826 455 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PPATQ06203 517 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 LPIN1Q14693 890 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 DEPDC1Q5TB30 811 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 NANOGNBQ7Z5D8 188 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 RELL1Q8IUW5 271 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ENAHQ8N8S7 591 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 EEF2KMTQ96G04 330 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 DNAJC1Q96KC8 554 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 CDC42EP4Q9H3Q1 356 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PLGRKTQ9HBL7 147 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ERVK-5Q9HDB9 667 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ASAP1Q9ULH1 1129 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 COL24A1Q17RW2 1714 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 NHSQ6T4R5 1651 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PVALEFA0A1B0GWK0 134 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 GYG2O15488 501 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PEX1O43933 1283 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 STK10O94804 968 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 OR6B1O95007 311 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 TFAP2AP05549 437 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ACTR3P61158 418 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PPP2R5CQ13362 524 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 CAMK2BQ13554 666 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 RHBDF2Q6PJF5 856 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 RBM44Q6ZP01 1051 aaKnown RBP8.64□□□□□ -1.03
CSDE1-214ENST00000530886 PPP1R14CQ8TAE6 165 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms