RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SCARF1Q14162 830 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 HHIPL2Q6UWX4 724 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 YAF2Q8IY57 180 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 N4BP2L2Q92802 583 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 TJP2Q9UDY2 1190 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 JCADQ9P266 1359 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 PFDN1O60925 122 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 PYGLP06737 847 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 COG2Q14746 738 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 EMC2Q15006 297 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 MORF4L2Q15014 288 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 TTC23LQ6PF05 361 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 TRIM54Q9BYV2 358 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 UBA6A0AVT1 1052 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 KCNN4O15554 427 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 DGAT1O75907 488 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■□□□□ 10.9
CTNND1-227ENST00000530748 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SNAPC2Q13487 334 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 STAT4Q14765 748 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 VPS72Q15906 364 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 LRIG3Q6UXM1 1119 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SLC35G2Q8TBE7 412 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 MED15Q96RN5 788 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 REEP2Q9BRK0 252 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CCSER1Q9C0I3 900 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 DDX47Q9H0S4 455 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 COG4Q9H9E3 785 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 DYRK4Q9NR20 520 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 USP27XA6NNY8 438 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CAMTA2O94983 1202 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 AP1ARQ63HQ0 302 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CNPY4Q8N129 248 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CCNYL1Q8N7R7 359 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 PPP1R2P1Q96PQ5 205 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 PARK7Q99497 189 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 BFARQ9NZS9 450 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 STX18Q9P2W9 335 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 DIAPH2O60879 1101 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CYBBP04839 570 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 RAD51Q06609 339 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SF3B3Q15393 1217 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 DDIASQ8IXT1 998 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 ATL2Q8NHH9 583 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 IGDCC4Q8TDY8 1250 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 TMEM106CQ9BVX2 250 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SPATS2LQ9NUQ6 558 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 UVRAGQ9P2Y5 699 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
CTNND1-227ENST00000530748 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 KBTBD13C9JR72 458 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 TRAPPC3O43617 180 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 CCDC22O60826 627 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SRGNP10124 158 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 HIF1AQ16665 826 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SGSM1Q2NKQ1 1148 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 SV2CQ496J9 727 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 STYK1Q6J9G0 422 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 MTHFD1LQ6UB35 978 aa8.95□□□□□ -0.98
CTNND1-227ENST00000530748 USP32Q8NFA0 1604 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 A0A1W2PQJ5 194 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 KCNQ2O43526 872 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 DNAJC6O75061 913 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 MYBP10242 640 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 BRAFP15056 766 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SCP2P22307 547 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 CHRNA5P30532 468 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 HSD17B4P51659 736 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ANO4Q32M45 955 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 LMBRD2Q68DH5 695 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ANKS3Q6ZW76 656 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 HIPK4Q8NE63 616 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SH3KBP1Q96B97 665 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 RNPC3Q96LT9 517 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SLC13A1Q9BZW2 595 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 NEUROG2Q9H2A3 272 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 HACL1Q9UJ83 578 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 CFAP69A5D8W1 941 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 CD4P01730 458 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FGFR4P22455 802 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FMO5P49326 533 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 LAMB3Q13751 1172 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 TRADDQ15628 312 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FASTKD1Q53R41 847 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 CLEC17AQ6ZS10 378 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ZC3H18Q86VM9 953 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 RAET1EQ8TD07 263 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms