RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 PTCD3Q96EY7 689 aaKnown RBP15.03■□□□□ -0
PCF11-204ENST00000530660 CLPTM1LQ96KA5 538 aa15.03■□□□□ -0
PCF11-204ENST00000530660 FBXO6Q9NRD1 293 aaPredicted RBP15.03■□□□□ -0
PCF11-204ENST00000530660 TP73O15350 636 aa15.03■□□□□ -0
PCF11-204ENST00000530660 UCHL3P15374 230 aa15.03■□□□□ -0
PCF11-204ENST00000530660 CRABP2P29373 138 aa15.03■□□□□ -0
PCF11-204ENST00000530660 CA8P35219 290 aa15.03■□□□□ -0
PCF11-204ENST00000530660 COG7P83436 770 aa15.03■□□□□ -0
PCF11-204ENST00000530660 PFKFB3Q16875 520 aaPredicted RBP15.03■□□□□ -0
PCF11-204ENST00000530660 RASSF3Q86WH2 238 aa15.03■□□□□ -0
PCF11-204ENST00000530660 LRRC43Q8N309 656 aa15.03■□□□□ -0
PCF11-204ENST00000530660 RFWD2Q8NHY2 731 aa15.03■□□□□ -0
PCF11-204ENST00000530660 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
PCF11-204ENST00000530660 C7orf43Q8WVR3 580 aa15.03■□□□□ -0
PCF11-204ENST00000530660 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
PCF11-204ENST00000530660 FGFBP2Q9BYJ0 223 aa15.03■□□□□ -0
PCF11-204ENST00000530660 NDE1Q9NXR1 346 aa15.03■□□□□ -0
PCF11-204ENST00000530660 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
PCF11-204ENST00000530660 A0A0G2JND7 137 aa15.02■□□□□ -0
PCF11-204ENST00000530660 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
PCF11-204ENST00000530660 PDE5AO76074 875 aa15.02■□□□□ -0
PCF11-204ENST00000530660 NAT1P18440 290 aa15.02■□□□□ -0
PCF11-204ENST00000530660 CHRNA3P32297 505 aa15.02■□□□□ -0
PCF11-204ENST00000530660 COBLL1Q53SF7 1204 aa15.02■□□□□ -0
PCF11-204ENST00000530660 GJB7Q6PEY0 223 aa15.02■□□□□ -0
PCF11-204ENST00000530660 KIF6Q6ZMV9 814 aa15.02■□□□□ -0
PCF11-204ENST00000530660 SV2BQ7L1I2 683 aa15.02■□□□□ -0
PCF11-204ENST00000530660 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
PCF11-204ENST00000530660 HEMK1Q9Y5R4 338 aaPredicted RBP15.02■□□□□ -0
PCF11-204ENST00000530660 MAGEB2O15479 319 aa15.02■□□□□ -0
PCF11-204ENST00000530660 THAP12O43422 761 aa15.02■□□□□ -0
PCF11-204ENST00000530660 TOM1O60784 492 aa15.02■□□□□ -0
PCF11-204ENST00000530660 HAUS5O94927 633 aa15.02■□□□□ -0
PCF11-204ENST00000530660 TTC4O95801 387 aa15.02■□□□□ -0
PCF11-204ENST00000530660 PGM1P36871 562 aa15.02■□□□□ -0
PCF11-204ENST00000530660 CALCOCO2Q13137 446 aa15.02■□□□□ -0
PCF11-204ENST00000530660 MED21Q13503 144 aa15.02■□□□□ -0
PCF11-204ENST00000530660 UNC13DQ70J99 1090 aa15.02■□□□□ -0
PCF11-204ENST00000530660 AGAP3Q96P47 875 aa15.02■□□□□ -0
PCF11-204ENST00000530660 MKNK1Q9BUB5 465 aa15.02■□□□□ -0
PCF11-204ENST00000530660 HEY2Q9UBP5 337 aa15.02■□□□□ -0
PCF11-204ENST00000530660 ADGRA3Q8IWK6 1321 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 CETN2P41208 172 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 HALP42357 657 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 KCNH2Q12809 1159 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 DLG1Q12959 904 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 FAM47AQ5JRC9 791 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 SAPCD2Q86UD0 394 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 NLRP10Q86W26 655 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 TRIM59Q8IWR1 403 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 C4orf33Q8N1A6 199 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 FBXO27Q8NI29 283 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 DHRS1Q96LJ7 313 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 SETDB2Q96T68 719 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 NACA2Q9H009 215 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 UBAP1Q9NZ09 502 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 PCYOX1Q9UHG3 505 aa15.02□□□□□ -0.01
PCF11-204ENST00000530660 WDR91A4D1P6 747 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 C2CD2LO14523 706 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 NDUFB5O43674 189 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 GAS8O95995 478 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 CALM1P0DP23 149 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 CALM2P0DP24 149 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 CALM3P0DP25 149 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 SLC5A1P13866 664 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 PORP16435 677 aaPredicted RBP15.01□□□□□ -0.01
PCF11-204ENST00000530660 SFT2D3Q587I9 215 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 C1orf228Q6PIY5 440 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 CCDC65Q8IXS2 484 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 ARHGEF26Q96DR7 871 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 NSL1Q96IY1 281 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 MAGEF1Q9HAY2 307 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 TXNDC9O14530 226 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 RPA3P35244 121 aaPredicted RBP15.01□□□□□ -0.01
PCF11-204ENST00000530660 TRIP13Q15645 432 aaPredicted RBP15.01□□□□□ -0.01
PCF11-204ENST00000530660 TTC7BQ86TV6 843 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 GLYCTKQ8IVS8 523 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 FNDC8Q8TC99 324 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 DOLKQ9UPQ8 538 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
PCF11-204ENST00000530660 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
PCF11-204ENST00000530660 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
PCF11-204ENST00000530660 ZBED4O75132 1171 aa15□□□□□ -0.01
PCF11-204ENST00000530660 DDAH1O94760 285 aa15□□□□□ -0.01
PCF11-204ENST00000530660 ZWINTO95229 277 aa15□□□□□ -0.01
PCF11-204ENST00000530660 BTKQ06187 659 aa15□□□□□ -0.01
PCF11-204ENST00000530660 KCTD21Q4G0X4 260 aa15□□□□□ -0.01
PCF11-204ENST00000530660 DEPTORQ8TB45 409 aa15□□□□□ -0.01
PCF11-204ENST00000530660 RSPH1Q8WYR4 309 aa15□□□□□ -0.01
PCF11-204ENST00000530660 DDX17Q92841 729 aaKnown RBP15□□□□□ -0.01
PCF11-204ENST00000530660 EMILIN3Q9NT22 766 aa15□□□□□ -0.01
PCF11-204ENST00000530660 TRMT112Q9UI30 125 aaKnown RBP15□□□□□ -0.01
PCF11-204ENST00000530660 TRAF3IP3Q9Y228 551 aa15□□□□□ -0.01
PCF11-204ENST00000530660 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
PCF11-204ENST00000530660 KIF13AQ9H1H9 1805 aa15□□□□□ -0.01
PCF11-204ENST00000530660 NFKBIAP25963 317 aa15□□□□□ -0.01
PCF11-204ENST00000530660 DYNLL1P63167 89 aaKnown RBP15□□□□□ -0.01
PCF11-204ENST00000530660 PPATQ06203 517 aa15□□□□□ -0.01
PCF11-204ENST00000530660 SLC1A5Q15758 541 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms