RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 LNX1Q8TBB1 728 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-219ENST00000530404 ADPGKQ9BRR6 497 aa22.88■■□□□ 1.25
TSPAN4-219ENST00000530404 FBXW11Q9UKB1 542 aa22.88■■□□□ 1.25
TSPAN4-219ENST00000530404 LIMCH1Q9UPQ0 1083 aa22.88■■□□□ 1.25
TSPAN4-219ENST00000530404 PRR23AA6NEV1 266 aa22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 PAPLNO95428 1278 aa22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 CCT6AP40227 531 aaKnown RBP22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 GRASPQ7Z6J2 395 aaPredicted RBP22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 CCDC105Q8IYK2 499 aa22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 GPR65Q8IYL9 337 aa22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 FOXP1Q9H334 677 aaPredicted RBP22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 CACNA1IQ9P0X4 2223 aa22.87■■□□□ 1.25
TSPAN4-219ENST00000530404 ANK1P16157 1881 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 LAMP2P13473 410 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 NT5DC1Q5TFE4 455 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 DTWD2Q8NBA8 298 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 GPR152Q8TDT2 470 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 PIK3R5Q8WYR1 880 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 RTP3Q9BQQ7 232 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 BHMT2Q9H2M3 363 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 WNT16Q9UBV4 365 aa22.86■■□□□ 1.25
TSPAN4-219ENST00000530404 DCHS1Q96JQ0 3298 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 PATJQ8NI35 1801 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 CCL16O15467 120 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 C1RP00736 705 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 SRFP11831 508 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 RFX1P22670 979 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 FSHRP23945 695 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 GNL2Q13823 731 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 PPP2R5AQ15172 486 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 ANGPT1Q15389 498 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 HAUS3Q68CZ6 603 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 C4orf32Q8N8J7 132 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 IFT74Q96LB3 600 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 RPP25Q9BUL9 199 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 GOLGA2P5Q9HBQ8 144 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 POLIQ9UNA4 740 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 KIAA1024Q9UPX6 916 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 NUMBLQ9Y6R0 609 aa22.85■■□□□ 1.25
TSPAN4-219ENST00000530404 DMXL1Q9Y485 3027 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 C8AP07357 584 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 HTR4Q13639 388 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 DCAF4L1Q3SXM0 396 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 PPM1LQ5SGD2 360 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 LIN9Q5TKA1 542 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 ATF7IP2Q5U623 682 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 CEP120Q8N960 986 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 FBXO18Q8NFZ0 1043 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 TBC1D17Q9HA65 648 aa22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 DDX19AQ9NUU7 478 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-219ENST00000530404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.84■■□□□ 1.255e-7■■■■■ 27.6
TSPAN4-219ENST00000530404 CLCNKBP51801 687 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 ORC2Q13416 577 aaPredicted RBP22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 SPECC1Q5M775 1068 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 FAM184AQ8NB25 1140 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 FGF14Q92915 247 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 NXPE3Q969Y0 559 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 LLPHQ9BRT6 129 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 LRWD1Q9UFC0 647 aa22.83■■□□□ 1.25
TSPAN4-219ENST00000530404 PP2D1A8MPX8 630 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 ANHXE9PGG2 379 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 I3L4J1 428 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 FXR2P51116 673 aaKnown RBP eCLIP22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 RSPO2Q6UXX9 243 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 SLC7A14Q8TBB6 771 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 SNX29Q8TEQ0 813 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 NKD2Q969F2 451 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 PPP1R10Q96QC0 940 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 HCFC1R1Q9NWW0 138 aa22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 NOL7Q9UMY1 257 aaKnown RBP22.82■■□□□ 1.24
TSPAN4-219ENST00000530404 CCDC169A6NNP5 214 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 E9PMD0 336 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 DCNP07585 359 aaKnown RBP22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 MUTP22033 750 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 TKTP29401 623 aaKnown RBP22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 OR1D2P34982 312 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 RBM25P49756 843 aaKnown RBP22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 EFNA5P52803 228 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 PEX3P56589 373 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 OSTNP61366 133 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 ELAVL2Q12926 359 aaKnown RBP22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 PARM1Q6UWI2 310 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 CD300LGQ6UXG3 332 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 C3orf58Q8NDZ4 430 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 ITFG1Q8TB96 612 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 KIFAP3Q92845 792 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 PCDHB6Q9Y5E3 794 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 ZNF292O60281 2723 aa22.81■■□□□ 1.24
TSPAN4-219ENST00000530404 K7ERI5 159 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 B3GAT3O94766 335 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 HNRNPA1P09651 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 FGFR3P22607 806 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 BRCC3P46736 316 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 TOB1P50616 345 aaPredicted RBP22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 HMGN5P82970 282 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 SOX4Q06945 474 aaPredicted RBP22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 PTGDRQ13258 359 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 AXDND1Q5T1B0 1012 aaPredicted RBP22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 ARHGEF3Q9NR81 526 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms