RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 DACT3Q96B18 629 aaPredicted RBP16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 DNAJC7Q99615 494 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 SLC9A2Q9UBY0 812 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 AFF2P51816 1311 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 MYMKA6NI61 221 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 PRLRP16471 622 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 CYB5D1Q6P9G0 228 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 CYP4F11Q9HBI6 524 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
PCDHA4-203ENST00000530339 OCA2Q04671 838 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 GRIN1Q05586 938 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 RBM15Q96T37 977 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 EIF2AQ9BY44 585 aaKnown RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 TRAF3IP3Q9Y228 551 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 MORF4L2Q15014 288 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 ALKBH8Q96BT7 664 aaKnown RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 SLC13A1Q9BZW2 595 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 ACAD9Q9H845 621 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 TMEM120BA0PK00 339 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 H3BQF6 201 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 P4HA2O15460 535 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 HSD17B3P37058 310 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 MKNK1Q9BUB5 465 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 PCDHA10Q9Y5I2 948 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 MRPS35P82673 323 aaKnown RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 CDC42EP1Q00587 391 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 SLC12A1Q13621 1099 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 CEP55Q53EZ4 464 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 LMCD1Q9NZU5 365 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 SUCLA2Q9P2R7 463 aaPredicted RBP16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 ENO4A6NNW6 628 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 PI4K2BG5E9Z4 385 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 HUS1O60921 280 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 DTNBP1Q96EV8 351 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 NOD2Q9HC29 1040 aa16.32■□□□□ 0.2
PCDHA4-203ENST00000530339 EIF3DO15371 548 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 NVLO15381 856 aaKnown RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 KLK7P49862 253 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 DNAJC9Q8WXX5 260 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 INO80Q9ULG1 1556 aaPredicted RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 ZBBXA8MT70 800 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 PMLP29590 882 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 RANBP1P43487 201 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 C16orf87Q6PH81 154 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 SKA2Q8WVK7 121 aaPredicted RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 ZBTB18Q99592 522 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 MTMR4Q9NYA4 1195 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 CYP26A1O43174 497 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 GPSM2P81274 684 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 ROR1Q01973 937 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 MED21Q13503 144 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 CATSPER1Q8NEC5 780 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 KLHL8Q9P2G9 620 aaPredicted RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 RNF103-CHMP3A0A140T963 221 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 RHPN2Q8IUC4 686 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 DTX3LQ8TDB6 740 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
PCDHA4-203ENST00000530339 FMO5P49326 533 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 LPAR1Q92633 364 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 TSSK1BQ9BXA7 367 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 WARS2Q9UGM6 360 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 ENTPD3O75355 529 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 MARK3P27448 753 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 BCAR1P56945 870 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 ING2Q9H160 280 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 PSMC1P62191 440 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 DUOXA2Q1HG44 320 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms