RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TSPAN1O60635 241 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ACTN1P12814 892 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 CD52P31358 61 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 POLR2FP61218 127 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 MYL7Q01449 175 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 NFX1Q12986 1120 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 PRPF4BQ13523 1007 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 MTF1Q14872 753 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 MFSD5Q6N075 450 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 RAD9BQ6WBX8 426 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 RRAGAQ7L523 313 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 BAP1Q92560 729 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 HAPLN2Q9GZV7 340 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 GANQ9H2C0 597 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 KIAA1586Q9HCI6 787 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 NLRC4Q9NPP4 1024 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 PLCB1Q9NQ66 1216 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 KCND1Q9NSA2 647 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ZNHIT6Q9NWK9 470 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 AGO2Q9UKV8 859 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ALPK3Q96L96 1907 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 TULP1O00294 542 aaPredicted RBP15.61■□□□□ 0.09
TTC39A-216ENST00000530004 KIAA0391O15091 583 aaKnown RBP15.61■□□□□ 0.09
TTC39A-216ENST00000530004 HOXA11P31270 313 aaPredicted RBP15.61■□□□□ 0.09
TTC39A-216ENST00000530004 CYP24A1Q07973 514 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 PAK2Q13177 524 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 MEA1Q16626 185 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 C1orf220Q5T0J3 134 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 WDR59Q6PJI9 974 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 TOGARAM2Q6ZUX3 1019 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 CCDC127Q96BQ5 260 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 MFSD14AQ96MC6 490 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 CHP1Q99653 195 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 MSTO1Q9BUK6 570 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 IFIH1Q9BYX4 1025 aaKnown RBP15.61■□□□□ 0.09
TTC39A-216ENST00000530004 PCDH10Q9P2E7 1040 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 CNTNAP2Q9UHC6 1331 aa15.61■□□□□ 0.09
TTC39A-216ENST00000530004 A0A0B4J269 797 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 ZNF233A6NK53 670 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 LRRC53A6NM62 1247 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 CXCL10P02778 98 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 ARF4P18085 180 aaPredicted RBP15.6■□□□□ 0.09
TTC39A-216ENST00000530004 RFC2P35250 354 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 PPP3CAQ08209 521 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 PLEKHG4Q58EX7 1191 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 KLHDC7AQ5VTJ3 777 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 DPY19L2P1Q6NXN4 242 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 PDXDC1Q6P996 788 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 TMEM199Q8N511 208 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 PARD3BQ8TEW8 1205 aa15.6■□□□□ 0.09
TTC39A-216ENST00000530004 ACO2Q99798 780 aaKnown RBP15.6■□□□□ 0.09
TTC39A-216ENST00000530004 CLDN3O15551 220 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 N4BP1O75113 896 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 TOM1L1O75674 476 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 HARSP12081 509 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 UCHL3P15374 230 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 CSF2RAP15509 400 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 SYN1P17600 705 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 AXLP30530 894 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 GCLMP48507 274 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 MCCD1P59942 119 aaPredicted RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 NCBP1Q09161 790 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 USP37Q86T82 979 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 DBF4BQ8NFT6 615 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 TMC2Q8TDI7 906 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 CPB2Q96IY4 423 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 PPP1R13BQ96KQ4 1090 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 DESI2Q9BSY9 194 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 SIX2Q9NPC8 291 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 PLAGL2Q9UPG8 496 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 PIN4Q9Y237 131 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 A0A1B0GUA9 196 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 LRRIQ3A6PVS8 624 aaPredicted RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 CCP110O43303 1012 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 LDHAP00338 332 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 HNRNPH3P31942 346 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 ACOT2P49753 483 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 CETN1Q12798 172 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 ATF7IP2Q5U623 682 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 TRIM65Q6PJ69 517 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 DEFB128Q7Z7B8 93 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 VWCEQ96DN2 955 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 POP1Q99575 1024 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 TCHPQ9BT92 498 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 INTS2Q9H0H0 1204 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 NUCKS1Q9H1E3 243 aaKnown RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 CHST12Q9NRB3 414 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 ZMYND8Q9ULU4 1186 aaPredicted RBP15.59■□□□□ 0.09
TTC39A-216ENST00000530004 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 PPP2R2CQ9Y2T4 447 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 FHOD1Q9Y613 1164 aa15.59■□□□□ 0.09
TTC39A-216ENST00000530004 P4HA2O15460 535 aa15.58■□□□□ 0.08
TTC39A-216ENST00000530004 ZSCAN12O43309 604 aa15.58■□□□□ 0.08
TTC39A-216ENST00000530004 DLATP10515 647 aaKnown RBP15.58■□□□□ 0.08
TTC39A-216ENST00000530004 MXI1P50539 228 aa15.58■□□□□ 0.08
TTC39A-216ENST00000530004 ENPEPQ07075 957 aa15.58■□□□□ 0.08
TTC39A-216ENST00000530004 TMEM132AQ24JP5 1023 aa15.58■□□□□ 0.08
TTC39A-216ENST00000530004 ZBTB41Q5SVQ8 909 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms