RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KCNA1Q09470 495 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 HYAL1Q12794 435 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 CUL4BQ13620 913 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 SLC10A6Q3KNW5 377 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 SEZ6Q53EL9 994 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 SLFN12LQ6IEE8 588 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 UNC13DQ70J99 1090 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 ADGRD2Q7Z7M1 963 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 VPS52Q8N1B4 723 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 HLA-CQ95604 372 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 SNX27Q96L92 541 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 PPP1R10Q96QC0 940 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 TCF25Q9BQ70 676 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 FGFBP2Q9BYJ0 223 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 THEGQ9P2T0 379 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 CITO14578 2027 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 TISP43B9A030 160 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 PRPF6O94906 941 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 EFEMP2O95967 443 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 CTSAP10619 480 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 KCNE1P15382 129 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 BMS1Q14692 1282 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 CTC1Q2NKJ3 1217 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 PLPP4Q5VZY2 271 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 STXBP4Q6ZWJ1 553 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 ATXN2LQ8WWM7 1075 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 ZMAT2Q96NC0 199 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 TLE6Q9H808 572 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 ENTPD7Q9NQZ7 604 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 CNTN3Q9P232 1028 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 CACNG4Q9UBN1 327 aa13.83□□□□□ -0.2
CCDC90B-216ENST00000529856 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 HIDE1A8MVS5 230 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 F8W810 466 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 KLRC4O43908 158 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 ZNF202O95125 648 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 CXCL14O95715 111 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 MYL1P05976 194 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 CXCL8P10145 99 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 ADSSP30520 456 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 GTF2F1P35269 517 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 TNFSF9P41273 254 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 NRIP1P48552 1158 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 ADAM15Q13444 863 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 SMC1AQ14683 1233 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 POSTNQ15063 836 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 DUSP6Q16828 381 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 FAM26FQ5R3K3 315 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 ZBTB41Q5SVQ8 909 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 EPM2AIP1Q7L775 607 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 RBM23Q86U06 439 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 RNF168Q8IYW5 571 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 EFHBQ8N7U6 833 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 RABGGTAQ92696 567 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 IGFLR1Q9H665 355 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 UBE2ZQ9H832 354 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 SLC38A7Q9NVC3 462 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 CPSF3Q9UKF6 684 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 AGO2Q9UKV8 859 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 IRAK3Q9Y616 596 aa13.82□□□□□ -0.2
CCDC90B-216ENST00000529856 C2orf71A6NGG8 1288 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 PER2O15055 1255 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 TADA2AO75478 443 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 SOD2P04179 222 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 ADRB2P07550 413 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 HOXD13P35453 343 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 TFF2Q03403 129 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 ENOX2Q16206 610 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 KRBA2Q6ZNG9 492 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 TAS1R1Q7RTX1 841 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms