RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 ZSWIM1Q9BR11 485 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 YIPF3Q9GZM5 350 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 NOP53Q9NZM5 478 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 NR2E1Q9Y466 385 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 MAPK13O15264 365 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 NOL4O94818 638 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TJP3O95049 919 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 ADRA2BP18089 450 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 SREBF1P36956 1147 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 GEN1Q17RS7 908 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 KCNT1Q5JUK3 1230 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 APOBEC3HQ6NTF7 200 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 ATL2Q8NHH9 583 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 INPP4AQ96PE3 977 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 MXRA8Q9BRK3 442 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 PPARGC1AQ9UBK2 798 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 USP15Q9Y4E8 981 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 PCDHGC5Q9Y5F6 944 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 ATRNO75882 1429 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 CCND2P30279 289 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 RPL21P46778 160 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 SCTRP47872 440 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 NXNQ6DKJ4 435 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 MIS18BP1Q6P0N0 1132 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 PAXIP1Q6ZW49 1069 aaPredicted RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 IRF2BP2Q7Z5L9 587 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TMEM35BQ8NCS4 154 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 MCEEQ96PE7 176 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 TRABDQ9H4I3 376 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 VCPKMTQ9H867 229 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 NPHS2Q9NP85 383 aa10.53□□□□□ -0.72
CCDC90B-214ENST00000529689 IGF2BP3O00425 579 aaKnown RBP eCLIP10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 MEIS2O14770 477 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 AGTP01019 485 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 C1orf228Q6PIY5 440 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 PALB2Q86YC2 1186 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 GPD1LQ8N335 351 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 SGSM3Q96HU1 749 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 GDF3Q9NR23 364 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 CTNNAL1Q9UBT7 734 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 HESX1Q9UBX0 185 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 FEM1BQ9UK73 627 aa10.52□□□□□ -0.72
CCDC90B-214ENST00000529689 SKAP2O75563 359 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 HLA-DRAP01903 254 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 FGRP09769 529 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 YY1P25490 414 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 CYP4A22Q5TCH4 519 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 AGBL2Q5U5Z8 902 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 CXorf56Q9H5V9 222 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 ATP6V0A4Q9HBG4 840 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 TRAF3IP3Q9Y228 551 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 PFASO15067 1338 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 E2F8A0AVK6 867 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 UBOX5O94941 541 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 MYBL1P10243 752 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 TMPRSS15P98073 1019 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 PPP3CAQ08209 521 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 RASIP1Q5U651 963 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 IQCKQ8N0W5 287 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 AGR3Q8TD06 166 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 FAF2Q96CS3 445 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 POLR3CQ9BUI4 534 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 GANQ9H2C0 597 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 C10orf88Q9H8K7 445 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 FIS1Q9Y3D6 152 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 NEU2Q9Y3R4 380 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 MYH2Q9UKX2 1941 aa10.52□□□□□ -0.73
CCDC90B-214ENST00000529689 GYG2O15488 501 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 OPHN1O60890 802 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 SMIM24O75264 130 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 STAMBPO95630 424 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 NR3C2P08235 984 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 RARAP10276 462 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 IL1R1P14778 569 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 CYP11B1P15538 503 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 SERPINB6P35237 376 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 CPA2P48052 419 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 RAD23BP54727 409 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 KRT76Q01546 638 aa10.51□□□□□ -0.73
CCDC90B-214ENST00000529689 ALCAMQ13740 583 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms