RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 HSPA1LP34931 641 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 BMT2Q1RMZ1 405 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 CHURC1Q8WUH1 139 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 CKAP2Q8WWK9 683 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 PLCD4Q9BRC7 762 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 TMEM109Q9BVC6 243 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 MYLK2Q9H1R3 596 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 CDC42EP4Q9H3Q1 356 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 WRAP73Q9P2S5 460 aaPredicted RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 HAO1Q9UJM8 370 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 ALG6Q9Y672 507 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 A0A1B0GVG6 124 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TISP43B9A030 160 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 IPO5O00410 1097 aaKnown RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 AHCYL1O43865 530 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 PHF2O75151 1096 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 PSMD10O75832 226 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 LUC7L3O95232 432 aaKnown RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 RARGP13631 454 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TTC8Q8TAM2 541 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 PWWP2AQ96N64 755 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TEKT3Q9BXF9 490 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 MTRF1LQ9UGC7 380 aaKnown RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 TCEAL9Q9UHQ7 104 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 ATAD5Q96QE3 1844 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TP73O15350 636 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TPBGLP0DKB5 382 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 NEFHP12036 1026 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 LMNB1P20700 586 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 TRAF1Q13077 416 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 PHC3Q8NDX5 983 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 RNPEPL1Q9HAU8 725 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 AAASQ9NRG9 546 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 ENTPD3O75355 529 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 CYP3A4P08684 503 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 CETPP11597 493 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 CALB2P22676 271 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 FOXN2P32314 431 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 RPS6KA3P51812 740 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 MXRA7P84157 204 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 STK33Q9BYT3 514 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 UBE2TQ9NPD8 197 aaPredicted RBP15.17■□□□□ 0.02
USP48-213ENST00000529637 RASAL2Q9UJF2 1139 aa15.17■□□□□ 0.02
USP48-213ENST00000529637 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP48-213ENST00000529637 ENTPD5O75356 428 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 BRAFP15056 766 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 CHKAP35790 457 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 PPP1R15BQ5SWA1 713 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 CWF19L1Q69YN2 538 aaKnown RBP15.16■□□□□ 0.02
USP48-213ENST00000529637 MIER3Q7Z3K6 550 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 LONP2Q86WA8 852 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 FAM13CQ8NE31 585 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 TEKT4Q8WW24 435 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 WDR11Q9BZH6 1224 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 CTTNBP2NLQ9P2B4 639 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 KLHL14Q9P2G3 628 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
USP48-213ENST00000529637 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 O00370 1275 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 TMEM253P0C7T8 217 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 GCLMP48507 274 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 LDHDQ86WU2 507 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 UCMAQ8WVF2 138 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 ERP27Q96DN0 273 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
USP48-213ENST00000529637 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 LGR5O75473 907 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 ART4Q93070 314 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 NUDCD1Q96RS6 583 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 MRIQ9BWK5 157 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 APEX2Q9UBZ4 518 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 NCANO14594 1321 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
USP48-213ENST00000529637 RFC5P40937 340 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 CETN1Q12798 172 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 TMEM154Q6P9G4 183 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 STK32AQ8WU08 396 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
USP48-213ENST00000529637 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
USP48-213ENST00000529637 STMN4Q9H169 189 aaPredicted RBP15.15■□□□□ 0.02
USP48-213ENST00000529637 EMSYQ7Z589 1322 aa15.15■□□□□ 0.02
USP48-213ENST00000529637 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms