RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 FAM167BQ9BTA0 163 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TMEM117Q9H0C3 514 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 APEX2Q9UBZ4 518 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 HERC5Q9UII4 1024 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 STXBP3O00186 592 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 SLC16A3O15427 465 aaKnown RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ATMINO43313 823 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 HIF1AQ16665 826 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 RABL6Q3YEC7 729 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 CDC42EP5Q6NZY7 148 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 CEP70Q8NHQ1 597 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 MCEEQ96PE7 176 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 PLEKHA5Q9HAU0 1116 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 DONSONQ9NYP3 566 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-220ENST00000529526 TMEM247A6NEH6 219 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 ASAP2O43150 1006 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 CTSHP09668 335 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 PDIA5Q14554 519 aa8.59□□□□□ -1.03
CTNND1-220ENST00000529526 A0A1B0GTH6 734 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 GGPS1O95749 300 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 NDUFB10O96000 172 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 HMBSP08397 361 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 NFKBIAP25963 317 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CCZ1BP86790 482 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CCZ1P86791 482 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CUL3Q13618 768 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 DHX34Q14147 1143 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 MFSD14CQ5VZR4 134 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 MMS22LQ6ZRQ5 1243 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ETNK1Q9HBU6 452 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TRPC7Q9HCX4 862 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 DNAJC6O75061 913 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 GRAP2O75791 330 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 PDGFRBP09619 1106 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ANTXR2P58335 489 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TPI1P60174 286 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ADSSL1Q8N142 457 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SH2D3CQ8N5H7 860 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 LINC00116Q8NCU8 138 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CASS4Q9NQ75 786 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 WARS2Q9UGM6 360 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 DBR1Q9UK59 544 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 FHOD1Q9Y613 1164 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TAF6LQ9Y6J9 622 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 RNF17Q9BXT8 1623 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ATP5HO75947 161 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 PYGBP11216 843 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 FMO5P49326 533 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 GALCP54803 685 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 USP49Q70CQ1 688 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 FASTKD5Q7L8L6 764 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 C7orf25Q9BPX7 421 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 LBHD1Q9BQE6 289 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CCDC90BQ9GZT6 254 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ING2Q9H160 280 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 BFARQ9NZS9 450 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SNX9Q9Y5X1 595 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 PFASO15067 1338 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SYCE1LA8MT33 242 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SRGNP10124 158 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 HSPA9P38646 679 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 STK4Q13043 487 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF235Q14590 738 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 LRRC8EQ6NSJ5 796 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SPATA2LQ8IUW3 424 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 RFWD2Q8NHY2 731 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SLC26A7Q8TE54 656 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 PLA2G12BQ9BX93 195 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 CHORDC1Q9UHD1 332 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 GNL1P36915 607 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 AP3M2P53677 418 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TAP1Q03518 808 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 SNRNP35Q16560 246 aaKnown RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 E4F1Q66K89 784 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ELMSAN1Q6PJG2 1045 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF560Q96MR9 790 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 PIDD1Q9HB75 910 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 TFR2Q9UP52 801 aa8.58□□□□□ -1.04
CTNND1-220ENST00000529526 ASB14A6NK59 587 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.044e-8■□□□□ 10.4
CTNND1-220ENST00000529526 SLC18A3Q16572 532 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 APPL2Q8NEU8 664 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 PBXIP1Q96AQ6 731 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 STK33Q9BYT3 514 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 ERCC6L2Q5T890 1561 aa8.57□□□□□ -1.04
CTNND1-220ENST00000529526 SYF2O95926 243 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms