RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TMEFF1Q8IYR6 380 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 KIAA0319LQ8IZA0 1049 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 NME8Q8N427 588 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 SLC44A3Q8N4M1 653 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 C12orf76Q8N812 135 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-212ENST00000528930 RDM1Q8NG50 284 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 RSAD2Q8WXG1 361 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 BAP1Q92560 729 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 OSBPL6Q9BZF3 934 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 AGO3Q9H9G7 860 aaKnown RBP9.48□□□□□ -0.89
SSBP3-212ENST00000528930 NGRNQ9NPE2 291 aaKnown RBP9.48□□□□□ -0.89
SSBP3-212ENST00000528930 SLC2A4RGQ9NR83 387 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 RAI2Q9Y5P3 530 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 EVPLQ92817 2033 aa9.48□□□□□ -0.89
SSBP3-212ENST00000528930 TBX3O15119 743 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 ARHGAP6O43182 974 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 N4BP1O75113 896 aaKnown RBP9.47□□□□□ -0.89
SSBP3-212ENST00000528930 GHRP10912 638 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
SSBP3-212ENST00000528930 PLCB3Q01970 1234 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 PRKCEQ02156 737 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 SRSF1Q07955 248 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSBP3-212ENST00000528930 SPIRE1Q08AE8 756 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 TMEM62Q0P6H9 643 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 PPP2R5CQ13362 524 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 STPG1Q5TH74 334 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 IER5Q5VY09 327 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 CKAP2LQ8IYA6 745 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 LINC01465Q8N7H1 131 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 MRPS27Q92552 414 aaKnown RBP9.47□□□□□ -0.89
SSBP3-212ENST00000528930 FAM20AQ96MK3 541 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 CEP89Q96ST8 783 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 NAP1L4Q99733 375 aaKnown RBP9.47□□□□□ -0.89
SSBP3-212ENST00000528930 BRMS1Q9HCU9 246 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 ENTPD7Q9NQZ7 604 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 NEUROG3Q9Y4Z2 214 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 KDM3AQ9Y4C1 1321 aa9.47□□□□□ -0.89
SSBP3-212ENST00000528930 KANSL1LA0AUZ9 987 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 CLASP2O75122 1294 aaKnown RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 GATMP50440 423 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 TRIM29Q14134 588 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 TARBP2Q15633 366 aaKnown RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 AASDHQ4L235 1098 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 GPR149Q86SP6 731 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 RTN4RL1Q86UN2 441 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 COLGALT1Q8NBJ5 622 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 C8orf76Q96K31 380 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 FAM167AQ96KS9 214 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 NIFKQ9BYG3 293 aaKnown RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 CELF4Q9BZC1 486 aaKnown RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
SSBP3-212ENST00000528930 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 CEP131Q9UPN4 1083 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 TRPV2Q9Y5S1 764 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 SDK1Q7Z5N4 2213 aa9.46□□□□□ -0.9
SSBP3-212ENST00000528930 DOPEY1Q5JWR5 2465 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 MTCL1Q9Y4B5 1905 aaKnown RBP9.45□□□□□ -0.9
SSBP3-212ENST00000528930 TMEM150BA6NC51 233 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 GIPC1O14908 333 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 MAGEB2O15479 319 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 KALRNO60229 2985 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 GPR32O75388 356 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 PRB1P04280 392 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 CD52P31358 61 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 NOVA1P51513 510 aaKnown RBP9.45□□□□□ -0.9
SSBP3-212ENST00000528930 EPHA7Q15375 998 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 XKR3Q5GH77 459 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 ANO5Q75V66 913 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 THNSL1Q8IYQ7 743 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 TMEM40Q8WWA1 233 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 CLDN23Q96B33 292 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 SHDQ96IW2 340 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 TMX3Q96JJ7 454 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 MTMR9Q96QG7 549 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 FOXP1Q9H334 677 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-212ENST00000528930 WRAP73Q9P2S5 460 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-212ENST00000528930 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 PADI3Q9ULW8 664 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 APC2O95996 2303 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 MYO9AB2RTY4 2548 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 TSC2P49815 1807 aa9.45□□□□□ -0.9
SSBP3-212ENST00000528930 PCNX2A6NKB5 2137 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 PIEZO2Q9H5I5 2752 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 IGKV6-21A0A0C4DH24 114 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 LOC100996750A0A140TA64 210 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms