RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 INO80BQ9C086 356 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CWH43Q9H720 699 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 ATP6V0A4Q9HBG4 840 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 IFT122Q9HBG6 1241 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 XPNPEP1Q9NQW7 623 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 ANKEF1Q9NU02 776 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 AGPAT5Q9NUQ2 364 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 DACT1Q9NYF0 836 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 SUCLA2Q9P2R7 463 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 PCDHA12Q9UN75 941 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 PLAGL2Q9UPG8 496 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 LZTS1Q9Y250 596 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 HCN4Q9Y3Q4 1203 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 COL4A3BPQ9Y5P4 624 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 PLXNA4Q9HCM2 1894 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 A0A087WZ62 844 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 TBKBP1A7MCY6 615 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 ZNF623O75123 536 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 OR52Z1P0C646 297 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 FGFR1P11362 822 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 ZSCAN20P17040 1043 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 PPM1AP35813 382 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 RARRES1P49788 294 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 GATMP50440 423 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 NPEPPSP55786 919 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 CYP4A11Q02928 519 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 HYAL1Q12794 435 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 PAN2Q504Q3 1202 aaKnown RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 CLLU1OSQ5K130 101 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 FAM102BQ5T8I3 360 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 SRGAP1Q7Z6B7 1085 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 RHPN2Q8IUC4 686 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 KLHL23Q8NBE8 558 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 COLGALT1Q8NBJ5 622 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 SPPL3Q8TCT6 385 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 PRPF31Q8WWY3 499 aaKnown RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 CCDC51Q96ER9 411 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 SCLT1Q96NL6 688 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 SH2D3AQ9BRG2 576 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 FDXACB1Q9BRP7 624 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 TMEM60Q9H2L4 133 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 RGL1Q9NZL6 768 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
ITGB1-218ENST00000528877 KIF3AQ9Y496 699 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 TRIOO75962 3097 aa7.86□□□□□ -1.15
ITGB1-218ENST00000528877 C2CD2LO14523 706 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 FSCN2O14926 492 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 INPPL1O15357 1258 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 ASAP2O43150 1006 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 MARCH6O60337 910 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 FGF18O76093 207 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 SPATA31C1P0DKV0 1188 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 XRCC6P12956 609 aaKnown RBP eCLIP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 CD33P20138 364 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 DNAJB1P25685 340 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 RPA1P27694 616 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 WEE1P30291 646 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 TXKP42681 527 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 MCM2P49736 904 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 PLCB3Q01970 1234 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 LAMTOR4Q0VGL1 99 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 CTTNQ14247 550 aaKnown RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 MXD4Q14582 209 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 TTC38Q5R3I4 469 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 ZNF468Q5VIY5 522 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 HAUS3Q68CZ6 603 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 GALNT6Q8NCL4 622 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 PPP2R3CQ969Q6 453 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 NLRP4Q96MN2 994 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 UPF2Q9HAU5 1272 aaKnown RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 FAM105AQ9NUU6 356 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 DBR1Q9UK59 544 aaKnown RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 PIN4Q9Y237 131 aaKnown RBP7.85□□□□□ -1.15
ITGB1-218ENST00000528877 PCDHB12Q9Y5F1 795 aa7.85□□□□□ -1.15
ITGB1-218ENST00000528877 CNTNAP2Q9UHC6 1331 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 LAD1O00515 517 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TBX10O75333 385 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 FGFR4P22455 802 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 KCNA5P22460 613 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 AXLP30530 894 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 HOXA11P31270 313 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 MCM7P33993 719 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 ARL2P36404 184 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 LTBRP36941 435 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 PRPHP41219 470 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 PTENP60484 403 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 GUCY1B3Q02153 619 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 CAPSQ13938 189 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TFDP1Q14186 410 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 XKR9Q5GH70 373 aa7.84□□□□□ -1.15
ITGB1-218ENST00000528877 CDCA2Q69YH5 1023 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-218ENST00000528877 TWF2Q6IBS0 349 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms