RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 A0A0B4J269 797 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 HNRNPDLO14979 420 aaKnown RBP18.4■□□□□ 0.54
HIF3A-211ENST00000528563 KCNC3Q14003 757 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 BMS1Q14692 1282 aaKnown RBP18.4■□□□□ 0.54
HIF3A-211ENST00000528563 SLC10A6Q3KNW5 377 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 TAS1R1Q7RTX1 841 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-211ENST00000528563 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-211ENST00000528563 RABGGTAQ92696 567 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 HVCN1Q96D96 273 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 PAAF1Q9BRP4 392 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 MAGEF1Q9HAY2 307 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 TBC1D7Q9P0N9 293 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 STYXL1Q9Y6J8 313 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 TRIP11Q15643 1979 aa18.4■□□□□ 0.54
HIF3A-211ENST00000528563 ANKRD63C9JTQ0 380 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 FAM189A1O60320 539 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 LILRB3O75022 631 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 HARSP12081 509 aaKnown RBP18.39■□□□□ 0.54
HIF3A-211ENST00000528563 KCNE1P15382 129 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 SEZ6Q53EL9 994 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 EP400NLQ6ZTU2 488 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 CCDC65Q8IXS2 484 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 AUTS2Q8WXX7 1259 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 SNX27Q96L92 541 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 ZMAT2Q96NC0 199 aaKnown RBP18.39■□□□□ 0.54
HIF3A-211ENST00000528563 PYM1Q9BRP8 204 aaKnown RBP18.39■□□□□ 0.54
HIF3A-211ENST00000528563 CLEC1BQ9P126 229 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 CACNG4Q9UBN1 327 aa18.39■□□□□ 0.54
HIF3A-211ENST00000528563 XIRP2A4UGR9 3374 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 A0A1B0GVL5 298 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 H3BQ06 376 aaPredicted RBP18.39■□□□□ 0.53
HIF3A-211ENST00000528563 GLP2RO95838 553 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 SOD2P04179 222 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 CLTAP09496 248 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 SLFN14P0C7P3 912 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 KCNA1Q09470 495 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
HIF3A-211ENST00000528563 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 TMEM184AQ6ZMB5 413 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 VN1R2Q8NFZ6 395 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 GPR62Q9BZJ7 368 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 CNTN3Q9P232 1028 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 ADAM28Q9UKQ2 775 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 HPSEQ9Y251 543 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 PCDHB13Q9Y5F0 798 aa18.39■□□□□ 0.53
HIF3A-211ENST00000528563 SPTBN5Q9NRC6 3674 aaKnown RBP18.38■□□□□ 0.53
HIF3A-211ENST00000528563 FAM237AA0A1B0GTK4 181 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 CASTOR2A6NHX0 329 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 OGTO15294 1046 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 TBX10O75333 385 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 PFKFB1P16118 471 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
HIF3A-211ENST00000528563 CASP5P51878 434 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 RBM10P98175 930 aaKnown RBP18.38■□□□□ 0.53
HIF3A-211ENST00000528563 PTPN14Q15678 1187 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 KYAT1Q16773 422 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 KIAA0319Q5VV43 1072 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 MSLNLQ96KJ4 702 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 COL25A1Q9BXS0 654 aaPredicted RBP18.38■□□□□ 0.53
HIF3A-211ENST00000528563 FGFBP2Q9BYJ0 223 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 IKZF4Q9H2S9 585 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 CHST7Q9NS84 486 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 SERTAD1Q9UHV2 236 aa18.38■□□□□ 0.53
HIF3A-211ENST00000528563 A0A1W2PQ27 194 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 A0A1W2PQ64 194 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 A0A1W2PQD8 194 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 TISP43B9A030 160 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ACTN4O43707 911 aaKnown RBP18.37■□□□□ 0.53
HIF3A-211ENST00000528563 CLASP2O75122 1294 aaKnown RBP18.37■□□□□ 0.53
HIF3A-211ENST00000528563 TADA2AO75478 443 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 GCNT3O95395 438 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ADRB2P07550 413 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 MYBP10242 640 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ADSSP30520 456 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
HIF3A-211ENST00000528563 COASYQ13057 564 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ALCAMQ13740 583 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
HIF3A-211ENST00000528563 SLFN12LQ6IEE8 588 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ACCSQ96QU6 501 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 HERC2P3Q9BVR0 1158 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 SLC38A7Q9NVC3 462 aa18.37■□□□□ 0.53
HIF3A-211ENST00000528563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.36■□□□□ 0.53
HIF3A-211ENST00000528563 GRXCR2A6NFK2 248 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 IGFBP6P24592 240 aaPredicted RBP18.36■□□□□ 0.53
HIF3A-211ENST00000528563 CASP1P29466 404 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 TNFSF9P41273 254 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 AFMP43652 599 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 ASIC1P78348 528 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 EHHADHQ08426 723 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 UPP1Q16831 310 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 PUS10Q3MIT2 529 aaKnown RBP18.36■□□□□ 0.53
HIF3A-211ENST00000528563 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
HIF3A-211ENST00000528563 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms