RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 TIPINQ9BVW5 301 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 STRA6Q9BX79 667 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 RANBP17Q9H2T7 1088 aaKnown RBP9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 PLEKHA4Q9H4M7 779 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 CNOT10Q9H9A5 744 aaKnown RBP9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 AGPAT3Q9NRZ7 376 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 APEX2Q9UBZ4 518 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 RASAL2Q9UJF2 1139 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 ZNF536O15090 1300 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 HTTP42858 3142 aa9.99□□□□□ -0.81
AP003063.1-201ENST00000528496 MEFVO15553 781 aaPredicted RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 PPFIA2O75334 1257 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 SLITRK3O94933 977 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 FSBPO95073 299 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 FAM107AO95990 144 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 CCL5P13501 91 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 VCAM1P19320 739 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 NMT1P30419 496 aaKnown RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 CTNNA1P35221 906 aaKnown RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 MCCD1P59942 119 aaPredicted RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 ZNF844Q08AG5 666 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 CETN1Q12798 172 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 BFSP1Q12934 665 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 CTTNQ14247 550 aaKnown RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 PLS1Q14651 629 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 MTFR1Q15390 333 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 UAP1Q16222 522 aaPredicted RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 NAA35Q5VZE5 725 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 B3GNT9Q6UX72 402 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 TMC3Q7Z5M5 1100 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 HOOK3Q86VS8 718 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 NLRP14Q86W24 1093 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 MYCBPAPQ8TBZ2 947 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 RIT2Q99578 217 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 DDX47Q9H0S4 455 aaKnown RBP9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 TMEM206Q9H813 350 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 PARP2Q9UGN5 583 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 ARID2Q68CP9 1835 aa9.98□□□□□ -0.81
AP003063.1-201ENST00000528496 SMCHD1A6NHR9 2005 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 ARHGEF35A5YM69 484 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 BUB1BO60566 1050 aaPredicted RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 MTA2O94776 668 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 INHAP05111 366 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 ELNP15502 786 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 MAPK4P31152 587 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 HOXA13P31271 388 aaPredicted RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 GCGRP47871 477 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 ATP1A2P50993 1020 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 RNASE9P60153 205 aaKnown RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 PPP2R2AP63151 447 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 CCNA1P78396 465 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 CEP55Q53EZ4 464 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 GJB7Q6PEY0 223 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 CATSPERGQ6ZRH7 1159 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 MMS22LQ6ZRQ5 1243 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 INTS8Q75QN2 995 aaKnown RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 CNPY4Q8N129 248 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 MICALL1Q8N3F8 863 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 SAMD3Q8N6K7 520 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 OTUD6BQ8N6M0 293 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 SLC35G2Q8TBE7 412 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 UBLCP1Q8WVY7 318 aaPredicted RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 SOCS4Q8WXH5 440 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 P3H4Q92791 437 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 CENPTQ96BT3 561 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 RPS6KC1Q96S38 1066 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 AGPAT1Q99943 283 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 PRR14Q9BWN1 585 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 AP1M1Q9BXS5 423 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 GPR88Q9GZN0 384 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 RNF208Q9H0X6 261 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 ST6GALNAC4Q9H4F1 302 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 RBPJLQ9UBG7 517 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 SLC12A6Q9UHW9 1150 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 DBR1Q9UK59 544 aaKnown RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 TMX2Q9Y320 296 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 ZNFX1Q9P2E3 1918 aaKnown RBP9.97□□□□□ -0.81
AP003063.1-201ENST00000528496 C5orf60A6NFR6 353 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 MYO1FO00160 1098 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 TNRC18O15417 2968 aaPredicted RBP9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 TTI1O43156 1089 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 DAPK3O43293 454 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 EXOC3O60645 756 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 PHF2O75151 1096 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 GJB1P08034 283 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 NUDT17P0C025 328 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 CHRNA3P32297 505 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 SNAP25P60880 206 aa9.96□□□□□ -0.82
AP003063.1-201ENST00000528496 DR1Q01658 176 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms