RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TLE2Q04725 743 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 NCBP1Q09161 790 aaKnown RBP20.36■□□□□ 0.85
SMPD1-203ENST00000527275 ZBTB41Q5SVQ8 909 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 C1orf53Q5VUE5 145 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 CCDC170Q8IYT3 715 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 FAM189A1O60320 539 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 NOL4O94818 638 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 ADRB2P07550 413 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 CYLC1P35663 651 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 DCAF17Q5H9S7 520 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 FAM26DQ5JW98 314 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 FBXO47Q5MNV8 452 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 TRAF7Q6Q0C0 670 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 CDT1Q9H211 546 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 AGO3Q9H9G7 860 aaKnown RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 CEP72Q9P209 647 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 PIN4Q9Y237 131 aaKnown RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 LRRC53A6NM62 1247 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 KIAA0391O15091 583 aaKnown RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 EXTL3O43909 919 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 GHRP10912 638 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 NFX1Q12986 1120 aaKnown RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 ARHGAP29Q52LW3 1261 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 TCERG1LQ5VWI1 586 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 CRELD2Q6UXH1 353 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 CAGE1Q8TC20 777 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 TOX2Q96NM4 488 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 ST3GAL5Q9UNP4 418 aa20.35■□□□□ 0.85
SMPD1-203ENST00000527275 REXO2Q9Y3B8 237 aaKnown RBP20.35■□□□□ 0.85
SMPD1-203ENST00000527275 DCDC2CA8MYV0 355 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 FANCGO15287 622 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 EN2P19622 333 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-203ENST00000527275 FAAP100Q0VG06 881 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 PDXDC1Q6P996 788 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 NECAB2Q7Z6G3 386 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 CEP120Q8N960 986 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 SLC35C1Q96A29 364 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 WDR24Q96S15 920 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 IRX2Q9BZI1 471 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-203ENST00000527275 TLR3O15455 904 aaKnown RBP20.34■□□□□ 0.85
SMPD1-203ENST00000527275 LDHAP00338 332 aaKnown RBP20.34■□□□□ 0.85
SMPD1-203ENST00000527275 CASQ1P31415 396 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 TNFSF9P41273 254 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 KRT83P78385 493 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 LPIN1Q14693 890 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 NOTUMQ6P988 496 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 THNSL1Q8IYQ7 743 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 KIAA1586Q9HCI6 787 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 NLRC4Q9NPP4 1024 aa20.34■□□□□ 0.85
SMPD1-203ENST00000527275 ZNF233A6NK53 670 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 TULP1O00294 542 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-203ENST00000527275 MAPK13O15264 365 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 OGTO15294 1046 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 CTIFO43310 598 aaKnown RBP20.33■□□□□ 0.85
SMPD1-203ENST00000527275 KIF5CO60282 957 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 OSTNP61366 133 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 BFSP1Q12934 665 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 MBTPS1Q14703 1052 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.85
SMPD1-203ENST00000527275 CCDC42Q96M95 316 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 NUCKS1Q9H1E3 243 aaKnown RBP20.33■□□□□ 0.85
SMPD1-203ENST00000527275 L2HGDHQ9H9P8 463 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 PADI3Q9ULW8 664 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 ATP11BQ9Y2G3 1177 aa20.33■□□□□ 0.85
SMPD1-203ENST00000527275 EIF3CLB5ME19 914 aaKnown RBP20.32■□□□□ 0.84
SMPD1-203ENST00000527275 AXLP30530 894 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 CD52P31358 61 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 ARHGAP25P42331 645 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 POLR2FP61218 127 aaKnown RBP20.32■□□□□ 0.84
SMPD1-203ENST00000527275 DLG4P78352 724 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 BFSP2Q13515 415 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 LRRC26Q2I0M4 334 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 TSC1Q92574 1164 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 CCDC127Q96BQ5 260 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 EIF3CQ99613 913 aaKnown RBP20.32■□□□□ 0.84
SMPD1-203ENST00000527275 ADPGKQ9BRR6 497 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 ARHGAP20Q9P2F6 1191 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 GPR182O15218 404 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 MCF2P10911 925 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 SELPP16109 830 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 CAPN2P17655 700 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 APBA1Q02410 837 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 EXOC3L4Q17RC7 722 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 SLC27A1Q6PCB7 646 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 LRRC8DQ7L1W4 858 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 PLEKHO2Q8TD55 490 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 MFSD14AQ96MC6 490 aa20.32■□□□□ 0.84
SMPD1-203ENST00000527275 UMODL1Q5DID0 1318 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 PITPNM1O00562 1244 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 ABL1P00519 1130 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 PLEKP08567 350 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-203ENST00000527275 KRT13P13646 458 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 SLC9A1P19634 815 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 VAMP7P51809 220 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 CYP24A1Q07973 514 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 TMEM192Q8IY95 271 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 EIF2AQ9BY44 585 aaKnown RBP20.31■□□□□ 0.84
SMPD1-203ENST00000527275 GANQ9H2C0 597 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 PLCB1Q9NQ66 1216 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 RBAKQ9NYW8 714 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms