RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SCNN1GP51170 649 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 PPP2R3AQ06190 1150 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 CYP24A1Q07973 514 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 CCDC40Q4G0X9 1142 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 PLEKHO2Q8TD55 490 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 FBXL18Q96ME1 805 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 RPS6KC1Q96S38 1066 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 NAT10Q9H0A0 1025 aaKnown RBP14.91□□□□□ -0.02
CD44-224ENST00000526669 PDE11AQ9HCR9 933 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 SAMSN1Q9NSI8 373 aaKnown RBP14.91□□□□□ -0.02
CD44-224ENST00000526669 HCSTQ9UBK5 93 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 NFE2L3Q9Y4A8 694 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 VWA8A3KMH1 1905 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 ARL5CA6NH57 179 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 GRXCR1A8MXD5 290 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 OFD1O75665 1012 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 POMCP01189 267 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 ATP2A2P16615 1042 aaKnown RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 PSMC2P35998 433 aaKnown RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 RABGGTBP53611 331 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 MYL5Q02045 173 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 KYAT1Q16773 422 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 CT47A1Q5JQC4 288 aaPredicted RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 RASIP1Q5U651 963 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 SPATA1Q5VX52 437 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 FAM109BQ6ICB4 259 aaPredicted RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 DHX40Q8IX18 779 aaKnown RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 ABI1Q8IZP0 508 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 CRIPAKQ8N1N5 446 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 ENOX1Q8TC92 643 aaKnown RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 CCDC127Q96BQ5 260 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 CEP63Q96MT8 703 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 SLC9A7Q96T83 725 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 ZBED2Q9BTP6 218 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 TOPORSQ9NS56 1045 aaPredicted RBP14.9□□□□□ -0.02
CD44-224ENST00000526669 PLAGL2Q9UPG8 496 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 GIT1Q9Y2X7 761 aa14.9□□□□□ -0.02
CD44-224ENST00000526669 TTC26A0AVF1 554 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 PTGESO14684 152 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 NFICP08651 508 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 TRIM49P0CI25 452 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 TRIM49CP0CI26 452 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
CD44-224ENST00000526669 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 NCAPHQ15003 741 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 IQCB1Q15051 598 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 NOMO2Q5JPE7 1267 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 JADE1Q6IE81 842 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 FILIP1Q7Z7B0 1213 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 LUZP1Q86V48 1076 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 HERC6Q8IVU3 1022 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 EFCAB13Q8IY85 973 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 RNF214Q8ND24 703 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 ZMAT2Q96NC0 199 aaKnown RBP14.89□□□□□ -0.03
CD44-224ENST00000526669 CASD1Q96PB1 797 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
CD44-224ENST00000526669 MMRN2Q9H8L6 949 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 CACNG4Q9UBN1 327 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 MYH10P35580 1976 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 PTPRJQ12913 1337 aa14.89□□□□□ -0.03
CD44-224ENST00000526669 LAMA2P24043 3122 aaKnown RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 MYO7AQ13402 2215 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 TSC2P49815 1807 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 BECN2A8MW95 431 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 SLC16A3O15427 465 aaKnown RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 HOXA2O43364 376 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 DGKIO75912 1065 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 IL18RAPO95256 599 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 GJB5O95377 273 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 FGFR1OPO95684 399 aaKnown RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 KRT13P13646 458 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 DLG4P78352 724 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 PSMD6Q15008 389 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 DCAF17Q5H9S7 520 aaPredicted RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 TCERG1LQ5VWI1 586 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 FAM43BQ6ZT52 329 aaPredicted RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 FAM200AQ8TCP9 573 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 URGCPQ8TCY9 931 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 C18orf25Q96B23 403 aaPredicted RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 MFSD14AQ96MC6 490 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 FNBP1Q96RU3 617 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 YME1L1Q96TA2 773 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 BPIFA3Q9BQP9 254 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 TMEM117Q9H0C3 514 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 THAP9Q9H5L6 903 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 GOLGA2P5Q9HBQ8 144 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
CD44-224ENST00000526669 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
CD44-224ENST00000526669 CNTN3Q9P232 1028 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms