RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KRT2P35908 639 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 RARRES1P49788 294 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 CDR1P51861 262 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 STARD6P59095 220 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 OSTNP61366 133 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 GRIK3Q13003 919 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 TUSC3Q13454 348 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 GRM2Q14416 872 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 ZNF174Q15697 407 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 MLF2Q15773 248 aaPredicted RBP7.27□□□□□ -1.25
CD44-221ENST00000526000 AXDND1Q5T1B0 1012 aaPredicted RBP7.27□□□□□ -1.25
CD44-221ENST00000526000 TANGO2Q6ICL3 276 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 CYP26C1Q6V0L0 522 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 TPRG1Q6ZUI0 275 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 TMEM130Q8N3G9 435 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 ATRIPQ8WXE1 791 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 BSNDQ8WZ55 320 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 RUBCNQ92622 972 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 CCDC51Q96ER9 411 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 SHDQ96IW2 340 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 BCO2Q9BYV7 579 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 SEMA4AQ9H3S1 761 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 PDZD7Q9H5P4 517 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 GOLGA2P5Q9HBQ8 144 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 SLC2A4RGQ9NR83 387 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 HEBP1Q9NRV9 189 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 NCDNQ9UBB6 729 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 NDRG2Q9UN36 371 aaKnown RBP7.27□□□□□ -1.25
CD44-221ENST00000526000 MRPS23Q9Y3D9 190 aaKnown RBP7.27□□□□□ -1.25
CD44-221ENST00000526000 PPME1Q9Y570 386 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 SF3B1O75533 1304 aaKnown RBP eCLIP7.27□□□□□ -1.25
CD44-221ENST00000526000 GVINP1Q7Z2Y8 2422 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 NRG2O14511 850 aaPredicted RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 N4BP3O15049 544 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 KINO60870 393 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 XYLBO75191 536 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 KRT37O76014 449 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 CDKL5O76039 1030 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 LARGE1O95461 756 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 PRKCBP05771 671 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 SPATA31C1P0DKV0 1188 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 GJA1P17302 382 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 KCNA4P22459 653 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 TARSP26639 723 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 TKTP29401 623 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 POU5F1BQ06416 359 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 PRPF4BQ13523 1007 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 PUM1Q14671 1186 aaKnown RBP eCLIP7.26□□□□□ -1.25
CD44-221ENST00000526000 PABPC1LQ4VXU2 614 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 VARS2Q5ST30 1063 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 NT5DC1Q5TFE4 455 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 CATSPER3Q86XQ3 398 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 IFNLR1Q8IU57 520 aaPredicted RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 ZBTB8OSQ8IWT0 167 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 HS6ST3Q8IZP7 471 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 SUMF1Q8NBK3 374 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 DEPTORQ8TB45 409 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 TCEAL4Q96EI5 215 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 CNTNAP3BQ96NU0 1288 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 NAP1L4Q99733 375 aaKnown RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 CORO1BQ9BR76 489 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 CNTNAP3Q9BZ76 1288 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 TM6SF1Q9BZW5 370 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 LTB4R2Q9NPC1 389 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 PRMT7Q9NVM4 692 aaPredicted RBP7.26□□□□□ -1.25
CD44-221ENST00000526000 FBXW11Q9UKB1 542 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 USP18Q9UMW8 372 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 CDY1Q9Y6F8 540 aa7.26□□□□□ -1.25
CD44-221ENST00000526000 COL4A3Q01955 1670 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ARHGEF35A5YM69 484 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 NEMFO60524 1076 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 LYPLA2O95372 231 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 RHOP08100 348 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 HNRNPA1P09651 372 aaKnown RBP eCLIP7.25□□□□□ -1.25
CD44-221ENST00000526000 HARSP12081 509 aaKnown RBP7.25□□□□□ -1.25
CD44-221ENST00000526000 CEBPBP17676 345 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ELF1P32519 619 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 CLCNKBP51801 687 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ATXN1P54253 815 aaKnown RBP7.25□□□□□ -1.25
CD44-221ENST00000526000 RAB33AQ14088 237 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ECM1Q16610 540 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 MAPK6Q16659 721 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ME3Q16798 604 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 SLC5A9Q2M3M2 681 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ZBTB41Q5SVQ8 909 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ZC3H14Q6PJT7 736 aaKnown RBP7.25□□□□□ -1.25
CD44-221ENST00000526000 PADI6Q6TGC4 694 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 CD300LGQ6UXG3 332 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 MTSS1LQ765P7 747 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 NPAS3Q8IXF0 933 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 DIS3L2Q8IYB7 885 aaKnown RBP7.25□□□□□ -1.25
CD44-221ENST00000526000 CEP120Q8N960 986 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 TNFRSF25Q93038 417 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 ADPGKQ9BRR6 497 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 RHOBTB2Q9BYZ6 727 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 FZD8Q9H461 694 aa7.25□□□□□ -1.25
CD44-221ENST00000526000 UPF2Q9HAU5 1272 aaKnown RBP7.25□□□□□ -1.25
CD44-221ENST00000526000 BRMS1Q9HCU9 246 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms