RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CCDC154A6NI56 674 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 NPIPB8E9PQR5 432 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 GOLIM4O00461 696 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 MAFGO15525 162 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 PQBP1O60828 265 aaKnown RBP5.65□□□□□ -1.5
CSDE1-211ENST00000525970 DTNBO60941 627 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 BCAR1P56945 870 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 DSC2Q02487 901 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 ABHD18Q0P651 414 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 MALLQ13021 153 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 FHL2Q14192 279 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 KIAA0753Q2KHM9 967 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 C3orf36Q3SXR2 165 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 NRN1LQ496H8 165 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 ANO6Q4KMQ2 910 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 AGBL4Q5VU57 503 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 DARS2Q6PI48 645 aaKnown RBP5.65□□□□□ -1.5
CSDE1-211ENST00000525970 LARP4Q71RC2 724 aaKnown RBP eCLIP5.65□□□□□ -1.5
CSDE1-211ENST00000525970 POLNQ7Z5Q5 900 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 FUKQ8N0W3 1084 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 CAMKK1Q8N5S9 505 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 OR14C36Q8NHC7 312 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 ATXN2LQ8WWM7 1075 aaKnown RBP5.65□□□□□ -1.5
CSDE1-211ENST00000525970 CGRRF1Q99675 332 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 ACE2Q9BYF1 805 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-211ENST00000525970 KIAA1683Q9H0B3 1180 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 OAZ3Q9UMX2 235 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 PCDHGB6Q9Y5F9 930 aa5.65□□□□□ -1.5
CSDE1-211ENST00000525970 SH3BP5O60239 455 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 CR2P20023 1033 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 HTR1BP28222 390 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 IL12RB1P42701 662 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 MCAMP43121 646 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 MRE11P49959 708 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 SPIDRQ14159 915 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 PCOLCEQ15113 449 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 DGKDQ16760 1214 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 USP39Q53GS9 565 aaKnown RBP5.64□□□□□ -1.51
CSDE1-211ENST00000525970 RNF220Q5VTB9 566 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 TRIM68Q6AZZ1 485 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 VPS37AQ8NEZ2 397 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 NRG4Q8WWG1 115 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 FATE1Q969F0 183 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 FAM89AQ96GI7 184 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 HERPUD2Q9BSE4 406 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 TRMT13Q9NUP7 481 aaKnown RBP5.64□□□□□ -1.51
CSDE1-211ENST00000525970 KCMF1Q9P0J7 381 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 EVLQ9UI08 416 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-211ENST00000525970 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
CSDE1-211ENST00000525970 A0A0A6YYJ9 748 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 ST20-MTHFSA0A0A6YYL1 179 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 RASA4BC9J798 803 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 TBX3O15119 743 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 RASA4O43374 803 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 PIP5K1CO60331 668 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 OPHN1O60890 802 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 MAFO75444 373 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 ZNF202O95125 648 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 HALP42357 657 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 GPR15P49685 360 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CACNB3P54284 484 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 ANTXR2P58335 489 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CDK17Q00537 523 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 PTH1RQ03431 593 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 PPP3CAQ08209 521 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CHAF1AQ13111 956 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 STK3Q13188 491 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CNN3Q15417 329 aaKnown RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 C1orf228Q6PIY5 440 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 USP30Q70CQ3 517 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 FAM9AQ8IZU1 332 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 NKAPQ8N5F7 415 aaKnown RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 OR5AN1Q8NGI8 311 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 DEPTORQ8TB45 409 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 DYDC2Q96IM9 177 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CCDC138Q96M89 665 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 HAPLN2Q9GZV7 340 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 C12orf65Q9H3J6 166 aaKnown RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 MTG2Q9H4K7 406 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CASS4Q9NQ75 786 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 LUZP4Q9P127 313 aa5.63□□□□□ -1.51
CSDE1-211ENST00000525970 WDR33Q9C0J8 1336 aaKnown RBP5.63□□□□□ -1.51
CSDE1-211ENST00000525970 CAPN8A6NHC0 703 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 PCDH8O95206 1070 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 ACO1P21399 889 aaKnown RBP5.62□□□□□ -1.51
CSDE1-211ENST00000525970 PEX2P28328 305 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 MCM7P33993 719 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 POU5F1BQ06416 359 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 PPARAQ07869 468 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 ADAM15Q13444 863 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 NFYCQ13952 458 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 CCDC178Q5BJE1 867 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 KLHDC10Q6PID8 442 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 BTNL9Q6UXG8 535 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms