RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SNX27Q96L92 541 aa13.45□□□□□ -0.26
CTTN-210ENST00000525852 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
CTTN-210ENST00000525852 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
CTTN-210ENST00000525852 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
CTTN-210ENST00000525852 ANK1P16157 1881 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 OGTO15294 1046 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 EIF3DO15371 548 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTTN-210ENST00000525852 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 CXCL8P10145 99 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 PPM1AP35813 382 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 YARSP54577 528 aaKnown RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 ERVFC1P60507 584 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 PLCB3Q01970 1234 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 STK4Q13043 487 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 PNOCQ13519 176 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 POSTNQ15063 836 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 XKR4Q5GH76 650 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 KANK3Q6NY19 840 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 STXBP4Q6ZWJ1 553 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 ZNF507Q8TCN5 953 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 IGSF21Q96ID5 467 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 VN1R3Q9BXE9 311 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 TOPORSQ9NS56 1045 aaPredicted RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 LMCD1Q9NZU5 365 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
CTTN-210ENST00000525852 A0A0C4DFX4 3053 aa13.44□□□□□ -0.26
CTTN-210ENST00000525852 SMIM28A0A1B0GU29 152 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 NRP1O14786 923 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 ALDH2P05091 517 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 THP07101 528 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 CLTAP09496 248 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 OR1G1P47890 313 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 UBE2HP62256 183 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
CTTN-210ENST00000525852 PTPROQ16827 1216 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 NELFCDQ8IXH7 590 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 TMEM130Q8N3G9 435 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 KIAA0895Q8NCT3 520 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 POMGNT1Q8WZA1 660 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 ERCC4Q92889 916 aaPredicted RBP13.43□□□□□ -0.26
CTTN-210ENST00000525852 TIGD1Q96MW7 591 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 PAAF1Q9BRP4 392 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 LMAN2LQ9H0V9 348 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 CNTN3Q9P232 1028 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
CTTN-210ENST00000525852 AGO2Q9UKV8 859 aaKnown RBP13.43□□□□□ -0.26
CTTN-210ENST00000525852 FAN1Q9Y2M0 1017 aa13.43□□□□□ -0.26
CTTN-210ENST00000525852 TTC26A0AVF1 554 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 CASTOR2A6NHX0 329 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TGFB1I1O43294 461 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 KCNE1P15382 129 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 IGFBP6P24592 240 aaPredicted RBP13.42□□□□□ -0.26
CTTN-210ENST00000525852 ACOT2P49753 483 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 UBE3AQ05086 875 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
CTTN-210ENST00000525852 PSMD2Q13200 908 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TUSC3Q13454 348 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TCEAL5Q5H9L2 206 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
CTTN-210ENST00000525852 ADGRD2Q7Z7M1 963 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 CBWD1Q9BRT8 395 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TLR9Q9NR96 1032 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 VCANP13611 3396 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 UBE4BO95155 1302 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 LACTBL1A8MY62 500 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 FSCN2O14926 492 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 RHOBTB3O94955 611 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 GARTP22102 1010 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.267e-7■■■■■ 33.5
CTTN-210ENST00000525852 KRT17Q04695 432 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 SPAG1Q07617 926 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 KYAT1Q16773 422 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TIGD5Q53EQ6 642 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 C18orf25Q96B23 403 aaPredicted RBP13.42□□□□□ -0.26
CTTN-210ENST00000525852 SAAL1Q96ER3 474 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 RPF1Q9H9Y2 349 aaKnown RBP13.42□□□□□ -0.26
CTTN-210ENST00000525852 PLEKHA5Q9HAU0 1116 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 GOLGA2P5Q9HBQ8 144 aa13.42□□□□□ -0.26
CTTN-210ENST00000525852 CARNS1A5YM72 827 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
CTTN-210ENST00000525852 ADRB2P07550 413 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 KCNB1Q14721 858 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 KNOP1Q1ED39 458 aaKnown RBP13.41□□□□□ -0.26
CTTN-210ENST00000525852 PLPP4Q5VZY2 271 aa13.41□□□□□ -0.26
CTTN-210ENST00000525852 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms