RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 PTPN7P35236 360 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 COILP38432 576 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 NAMPTP43490 491 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 GCLMP48507 274 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 GUCY2FP51841 1108 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 LMNB2Q03252 620 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 CBLBQ13191 982 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ENOX2Q16206 610 aaKnown RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 GNPTABQ3T906 1256 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ZACNQ401N2 412 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 C6orf118Q5T5N4 469 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 DRICH1Q6PGQ1 229 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SLC30A10Q6XR72 485 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PALB2Q86YC2 1186 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PHF13Q86YI8 300 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 BBOF1Q8ND07 529 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ZNF280CQ8ND82 737 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ZNF564Q8TBZ8 553 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 GRK7Q8WTQ7 553 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SLC20A1Q8WUM9 679 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SEMA4DQ92854 862 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 CEP89Q96ST8 783 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 IKZF4Q9H2S9 585 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 EFCC1Q9HA90 598 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 RAVER2Q9HCJ3 691 aaKnown RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ZNF214Q9UL59 606 aaPredicted RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PASKQ96RG2 1323 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 WDR81Q562E7 1941 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 DENND3A2RUS2 1198 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ANKRD63C9JTQ0 380 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ATP9AO75110 1047 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SGPL1O95470 568 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 C4BPAP04003 597 aaKnown RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SUPT20HL2P0C7V6 817 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ITIH2P19823 946 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ARL2P36404 184 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 PMS2P54278 862 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 UBXN2AP68543 259 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 DHX9Q08211 1270 aaKnown RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 ARHGAP44Q17R89 818 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 NBPF9Q3BBW0 867 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SUPT20HL1Q3ZLR7 823 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 LRRC38Q5VT99 294 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 RHBDF2Q6PJF5 856 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 LBX2Q6XYB7 198 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 SV2AQ7L0J3 742 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 TADA2BQ86TJ2 420 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 NLRP14Q86W24 1093 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 UBR7Q8N806 425 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 MYCBPAPQ8TBZ2 947 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 IFT74Q96LB3 600 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 DHX33Q9H6R0 707 aaKnown RBP5.85□□□□□ -1.47
CLINT1-208ENST00000524306 CYP26B1Q9NR63 512 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 RNF146Q9NTX7 359 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 RSPH14Q9UHP6 348 aa5.85□□□□□ -1.47
CLINT1-208ENST00000524306 LCTP09848 1927 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 GMNCA6NCL1 334 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 NDUFAB1O14561 156 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 POTEJP0CG39 1038 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 MMP13P45452 471 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 PTK6Q13882 451 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 TRADDQ15628 312 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 NAA35Q5VZE5 725 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 FOXR1Q6PIV2 292 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ZPBP2Q6X784 338 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CATSPERGQ6ZRH7 1159 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CBWD2Q8IUF1 395 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CDAN1Q8IWY9 1227 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 MCOLN2Q8IZK6 566 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CCHCR1Q8TD31 782 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ZNF473Q8WTR7 871 aaKnown RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 NUP85Q9BW27 656 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 TEX13BQ9BXU2 312 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 PORCNQ9H237 461 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ACAD9Q9H845 621 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ACTR5Q9H9F9 607 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 JPH1Q9HDC5 661 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 XPNPEP1Q9NQW7 623 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 HOXC10Q9NYD6 342 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CYP39A1Q9NYL5 469 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 SLC9A2Q9UBY0 812 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ZBTB12Q9Y330 459 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 SAMM50Q9Y512 469 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CTDP1Q9Y5B0 961 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 FAM169AQ9Y6X4 670 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 COL11A1P12107 1806 aaPredicted RBP5.84□□□□□ -1.47
CLINT1-208ENST00000524306 ADGRA2Q96PE1 1338 aa5.84□□□□□ -1.47
CLINT1-208ENST00000524306 CYP26A1O43174 497 aa5.84□□□□□ -1.48
CLINT1-208ENST00000524306 ZNF862O60290 1169 aa5.84□□□□□ -1.48
CLINT1-208ENST00000524306 LSM8O95777 96 aaKnown RBP5.84□□□□□ -1.48
CLINT1-208ENST00000524306 GHRP10912 638 aa5.84□□□□□ -1.48
CLINT1-208ENST00000524306 PTPRAP18433 802 aa5.84□□□□□ -1.48
CLINT1-208ENST00000524306 EIF2AK2P19525 551 aaKnown RBP5.84□□□□□ -1.48
CLINT1-208ENST00000524306 ACO1P21399 889 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms