RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 TOPORSQ9NS56 1045 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 STIM2Q9P246 746 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SUCLA2Q9P2R7 463 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SALL4Q9UJQ4 1053 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 DIS3Q9Y2L1 958 aaKnown RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SLC45A1Q9Y2W3 748 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 CCDC188H7C350 402 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 PDE2AO00408 941 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 CLDN3O15551 220 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 CYP26A1O43174 497 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 HBP1O60381 514 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 LGR5O75473 907 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 GH1P01241 217 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 HLA-DRAP01903 254 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 TBXAS1P24557 533 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 PHKA2P46019 1235 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 GPC5P78333 572 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 GCNT1Q02742 428 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 CAPSQ13938 189 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 C1orf220Q5T0J3 134 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 SEL1L2Q5TEA6 688 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 ARMCX2Q7L311 632 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 IFNL1Q8IU54 200 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 FAM71AQ8IYT1 594 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 SLC35G2Q8TBE7 412 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 TAS1R2Q8TE23 839 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 SHC3Q92529 594 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 DHX38Q92620 1227 aaKnown RBP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 GPR20Q99678 358 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 TARS2Q9BW92 718 aaKnown RBP11.57□□□□□ -0.56
SPIDR-222ENST00000524006 PLVAPQ9BX97 442 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 RBPJLQ9UBG7 517 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 NENFQ9UMX5 172 aa11.57□□□□□ -0.56
SPIDR-222ENST00000524006 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 MIF4GDA9UHW6 222 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PDHXO00330 501 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ALDH1A1P00352 501 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 TNNC2P02585 160 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 FTLP02792 175 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ZBTB48P10074 688 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ATP4AP20648 1035 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 GJA5P36382 358 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ACOT2P49753 483 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 EPHB4P54760 987 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 YWHAEP62258 255 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 CDR2Q01850 454 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 TRPC3Q13507 836 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 LAMC2Q13753 1193 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 SMC1AQ14683 1233 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PDCD11Q14690 1871 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PPP2R5EQ16537 467 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PTPROQ16827 1216 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF568Q3ZCX4 644 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 BEND6Q5SZJ8 279 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 LIN9Q5TKA1 542 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 C11orf63Q6NUN7 778 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 TRIM72Q6ZMU5 477 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 SV2AQ7L0J3 742 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 APBB1IPQ7Z5R6 666 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ZBTB33Q86T24 672 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF677Q86XU0 584 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 METTL13Q8N6R0 699 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 ZSWIM2Q8NEG5 633 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 SLC30A5Q8TAD4 765 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PLEKHO2Q8TD55 490 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 EPS8L1Q8TE68 723 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 MORC4Q8TE76 937 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 UBE2Q2Q8WVN8 375 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 PRPF31Q8WWY3 499 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 NLRP4Q96MN2 994 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 POP1Q99575 1024 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 THAP2Q9H0W7 228 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 RBM12Q9NTZ6 932 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 COQ4Q9Y3A0 265 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 NOC2LQ9Y3T9 749 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
SPIDR-222ENST00000524006 RANBP2P49792 3224 aaKnown RBP11.56□□□□□ -0.56
SPIDR-222ENST00000524006 SZT2Q5T011 3432 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 DNAJC25-GNG10A0A024R161 153 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 INO80B-WBP1J3KQ70 363 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 KRIT1O00522 736 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 ASAP2O43150 1006 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 SPOPO43791 374 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 BUB1BO60566 1050 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-222ENST00000524006 TOM1L1O75674 476 aa11.55□□□□□ -0.56
SPIDR-222ENST00000524006 HEXIM1O94992 359 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms