RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SH3RF1Q7Z6J0 888 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 HAS1Q92839 578 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAF2Q96CS3 445 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 DNAJC7Q99615 494 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 NAGPAQ9UK23 515 aa13.9□□□□□ -0.19
PCDHGB1-201ENST00000523390 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 BMP6P22004 513 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 GGCXP38435 758 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 GTF2A2P52657 109 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 GLIS3Q8NEA6 775 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 DHX35Q9H5Z1 703 aaKnown RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 A1CFQ9NQ94 594 aaKnown RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 CDH6P55285 790 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 TSPY1Q01534 308 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 DGKZQ13574 1117 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 DGKDQ16760 1214 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 CREB3O43889 395 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 C4orf50Q6ZRC1 276 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 SDCCAG8Q86SQ7 713 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 TTC39CQ8N584 583 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZNF384Q8TF68 577 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 STMN2Q93045 179 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 TMEM117Q9H0C3 514 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 MROH8Q9H579 483 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 OLFML3Q9NRN5 406 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAM49BQ9NUQ9 324 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
PCDHGB1-201ENST00000523390 F5H423 210 aaPredicted RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 P4HA2O15460 535 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 IL9RQ01113 521 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 FHDC1Q9C0D6 1143 aaPredicted RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 UVRAGQ9P2Y5 699 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 MT-ND3P03897 115 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 LCP1P13796 627 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 GUCY2CP25092 1073 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 EIF3BP55884 814 aaKnown RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 BCAR1P56945 870 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 IL17AQ16552 155 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 SAMD3Q8N6K7 520 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 MORC4Q8TE76 937 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 RANBP17Q9H2T7 1088 aaKnown RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 STAP1Q9ULZ2 295 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 ELF1P32519 619 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 PDCLQ13371 301 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 C2CD6Q53TS8 623 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 NIF3L1Q9GZT8 377 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 CCDC68Q9H2F9 335 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLITRK6Q9H5Y7 841 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 ALG6Q9Y672 507 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 GRAP2O75791 330 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 CA4P22748 312 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 GPS1Q13098 491 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 NME3Q13232 169 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 KYAT1Q16773 422 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
PCDHGB1-201ENST00000523390 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 WDR91A4D1P6 747 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 CIB2O75838 187 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 TMEM253P0C7T8 217 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 COMTP21964 271 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 GTF2H1P32780 548 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 LIG3P49916 1009 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 IFT88Q13099 833 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 VGLL4Q14135 290 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 AFAP1L2Q8N4X5 818 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 EXOC4Q96A65 974 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 ADAM21Q9UKJ8 722 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 CAPN6Q9Y6Q1 641 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 OGTO15294 1046 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 TTI1O43156 1089 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms