RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	PABPN1L	A6NDY0	278 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288		H3BNX3	289 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAGEC1	O60732	1142 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	OXSR1	O95747	527 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CAPNS1	P04632	268 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSPA1A	P0DMV8	641 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSPA1B	P0DMV9	641 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MYCL	P12524	364 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ALAS1	P13196	640 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	TKT	P29401	623 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP5D	P30049	168 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SYK	P43405	635 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	DRG2	P55039	364 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	EXOSC10	Q01780	885 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RCN2	Q14257	317 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MTFR1	Q15390	333 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	INSC	Q1MX18	579 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT24	Q2M2I5	525 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MFSD14B	Q5SR56	506 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	DCAF15	Q66K64	600 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	KCTD16	Q68DU8	428 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	KLHL35	Q6PF15	583 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	TAOK1	Q7L7X3	1001 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	VPS36	Q86VN1	386 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MARVELD2	Q8N4S9	558 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	UCMA	Q8WVF2	138 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CLIP3	Q96DZ5	547 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF496	Q96IT1	587 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	NUDCD1	Q96RS6	583 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	PHAX	Q9H814	394 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LGR6	Q9HBX8	967 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	VTA1	Q9NP79	307 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RBM8A	Q9Y5S9	174 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CHD4	Q14839	1912 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CCDC188	H7C350	402 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288		M0QZ92	97 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZBTB24	O43167	697 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	PSMG1	O95456	288 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTDNEP1	O95476	244 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MMP10	P09238	476 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CHRNB1	P11230	501 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTF3	P20290	206 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ANXA13	P27216	316 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	HSD17B4	P51659	736 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	UBE4A	Q14139	1066 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LPIN1	Q14693	890 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTC1	Q2NKJ3	1217 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMCO4	Q5TGY1	634 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	C4orf50	Q6ZRC1	276 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	NEK10	Q6ZWH5	1172 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	BEND5	Q7L4P6	421 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ITIH5	Q86UX2	942 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LRRC34	Q8IZ02	419 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASGEF1C	Q8N431	466 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LSMEM1	Q8N8F7	131 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ENAH	Q8N8S7	591 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC43A3	Q8NBI5	491 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RNF169	Q8NCN4	708 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF507	Q8TCN5	953 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SYN2	Q92777	582 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RMDN1	Q96DB5	314 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CNDP2	Q96KP4	475 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	C8orf48	Q96LL4	319 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MEIS3	Q99687	375 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ECSIT	Q9BQ95	431 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	B3GNT4	Q9C0J1	378 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SMARCAD1	Q9H4L7	1026 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC52A2	Q9HAB3	445 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	USP40	Q9NVE5	1235 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	GID8	Q9NWU2	228 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAFF	Q9ULX9	164 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	IFT52	Q9Y366	437 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	NOC2L	Q9Y3T9	749 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	NOX1	Q9Y5S8	564 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ARAP2	Q8WZ64	1704 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ABCA3	Q99758	1704 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	STK36	Q9NRP7	1315 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	FUOM	A2VDF0	154 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASA4B	C9J798	803 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288		H0YJX3	145 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RNF103	O00237	685 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	CASQ2	O14958	399 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	XPO1	O14980	1071 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	FOXP2	O15409	715 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASA4	O43374	803 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	LDHA	P00338	332 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SERPINB2	P05120	415 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ALOX5	P09917	674 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	MARK3	P27448	753 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	PAFAH1B1	P43034	410 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	SCNN1D	P51172	638 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF568	Q3ZCX4	644 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	DHX32	Q7L7V1	743 aa	Known RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	ADAMTSL2	Q86TH1	951 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	AHI1	Q8N157	1196 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	RIBC1	Q8N443	379 aa	Predicted RBP	4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	KCTD17	Q8N5Z5	321 aa		4.09	□□□□□ -1.75
FAM49B-225	ENST00000523288	GOLM1	Q8NBJ4	401 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms