RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 KIF4AO95239 1232 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 PIGRP01833 764 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 ALDH2P05091 517 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 LIG4P49917 911 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 COASYQ13057 564 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 TUSC3Q13454 348 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 ZNF720Q7Z2F6 126 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 RNF168Q8IYW5 571 aaPredicted RBP19.54■□□□□ 0.72
CLK4-211ENST00000522556 FEZF2Q8TBJ5 459 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 CCDC94Q9BW85 323 aaPredicted RBP19.54■□□□□ 0.72
CLK4-211ENST00000522556 GPR62Q9BZJ7 368 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 BLZF1Q9H2G9 400 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 TNMDQ9H2S6 317 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 PANK4Q9NVE7 773 aa19.54■□□□□ 0.72
CLK4-211ENST00000522556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 H0YCG3 227 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 THP07101 528 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 CXCL8P10145 99 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 CTSAP10619 480 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 IL9P15248 144 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 PFKFB1P16118 471 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 MATR3P43243 847 aaKnown RBP eCLIP19.53■□□□□ 0.72
CLK4-211ENST00000522556 SPAG1Q07617 926 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 KCNC3Q14003 757 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 SMC1AQ14683 1233 aaKnown RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 PTPN14Q15678 1187 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 SLC10A6Q3KNW5 377 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 LEXMQ3ZCV2 418 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 XKR4Q5GH76 650 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 LLGL2Q6P1M3 1020 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 ALKAL1Q6UXT8 129 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 EFHBQ8N7U6 833 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 MRPL43Q8N983 215 aaKnown RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 ST6GALNAC4Q9H4F1 302 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 MRPL44Q9H9J2 332 aaKnown RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 NGRNQ9NPE2 291 aaKnown RBP19.53■□□□□ 0.72
CLK4-211ENST00000522556 SERTAD1Q9UHV2 236 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 KCNH3Q9ULD8 1083 aa19.53■□□□□ 0.72
CLK4-211ENST00000522556 SMIM28A0A1B0GU29 152 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 C2CD2LO14523 706 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 CLDN3O15551 220 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
CLK4-211ENST00000522556 GCNT3O95395 438 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 CXCL14O95715 111 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 AFMP43652 599 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 ASIC1P78348 528 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 HERC4Q5GLZ8 1057 aaPredicted RBP19.52■□□□□ 0.72
CLK4-211ENST00000522556 FUT10Q6P4F1 479 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 IQUBQ8NA54 791 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 C3orf58Q8NDZ4 430 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 ZSWIM2Q8NEG5 633 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 ADAMTS19Q8TE59 1207 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 MSLNLQ96KJ4 702 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 ACAP3Q96P50 834 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 KCNG1Q9UIX4 513 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 CDH22Q9UJ99 828 aa19.52■□□□□ 0.72
CLK4-211ENST00000522556 CLASP2O75122 1294 aaKnown RBP19.51■□□□□ 0.71
CLK4-211ENST00000522556 PRPF6O94906 941 aaKnown RBP19.51■□□□□ 0.71
CLK4-211ENST00000522556 GAP43P17677 238 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 NDUFV1P49821 464 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 CUL4BQ13620 913 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
CLK4-211ENST00000522556 PDE12Q6L8Q7 609 aaKnown RBP19.51■□□□□ 0.71
CLK4-211ENST00000522556 CD300LGQ6UXG3 332 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 APBB1IPQ7Z5R6 666 aaPredicted RBP19.51■□□□□ 0.71
CLK4-211ENST00000522556 CUEDC2Q9H467 287 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 OLFML3Q9NRN5 406 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 CNTN3Q9P232 1028 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 SEL1LQ9UBV2 794 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 ADAM28Q9UKQ2 775 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 HPSEQ9Y251 543 aa19.51■□□□□ 0.71
CLK4-211ENST00000522556 A0A0B4J269 797 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 GRXCR2A6NFK2 248 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 LILRB3O75022 631 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 SOD2P04179 222 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 ADSSP30520 456 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 CLCNKBP51801 687 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 YARSP54577 528 aaKnown RBP19.5■□□□□ 0.71
CLK4-211ENST00000522556 ENOX2Q16206 610 aaKnown RBP19.5■□□□□ 0.71
CLK4-211ENST00000522556 ADALQ6DHV7 355 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 PTCRAQ6ISU1 281 aaPredicted RBP19.5■□□□□ 0.71
CLK4-211ENST00000522556 PPP2R3CQ969Q6 453 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 MSTO1Q9BUK6 570 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 COLEC11Q9BWP8 271 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 APOL5Q9BWW9 433 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 TOPORSQ9NS56 1045 aaPredicted RBP19.5■□□□□ 0.71
CLK4-211ENST00000522556 TUBGCP4Q9UGJ1 667 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 HCFC2Q9Y5Z7 792 aa19.5■□□□□ 0.71
CLK4-211ENST00000522556 I3L4J1 428 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 DLL1O00548 723 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 CNPP09543 421 aaKnown RBP19.49■□□□□ 0.71
CLK4-211ENST00000522556 KCNE1P15382 129 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 EPCAMP16422 314 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 CMA1P23946 247 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 HOXD13P35453 343 aa19.49■□□□□ 0.71
CLK4-211ENST00000522556 GUCY2FP51841 1108 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms