RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PHACTR3Q96KR7 559 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 WDR92Q96MX6 357 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 TAAR9Q96RI9 348 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ACO2Q99798 780 aaKnown RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 CSRNP2Q9H175 543 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 LDAHQ9H6V9 325 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 L2HGDHQ9H9P8 463 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 NMRK2Q9NPI5 230 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 CHST12Q9NRB3 414 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 SCOCQ9UIL1 159 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 FAM184BQ9ULE4 1060 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 CNOT6Q9ULM6 557 aaKnown RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 IPPQ9Y573 584 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 RBM8AQ9Y5S9 174 aaKnown RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 SHPRHQ149N8 1683 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZNF335Q9H4Z2 1342 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ITSN1Q15811 1721 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 POLR3AO14802 1390 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 NPC1L1Q9UHC9 1359 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 TECPR2O15040 1411 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 USP6P35125 1406 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 EDC4Q6P2E9 1401 aaKnown RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADAMTS20P59510 1910 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 NALCNQ8IZF0 1738 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 A0A1W2PR48 441 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 C2orf78A6NCI8 922 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 TCAF2A6NFQ2 919 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 NPIPB6E9PJ23 425 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 WNT10BO00744 389 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 AKR1B10O60218 316 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 OFD1O75665 1012 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 GAAP10253 952 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 HSPA6P17066 643 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 XPAP23025 273 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 GLDCP23378 1020 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 CTSSP25774 331 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 RPL13P26373 211 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 POLD1P28340 1107 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 TMPOP42166 694 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 MRE11P49959 708 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 RIPK4P57078 832 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 SLFN5Q08AF3 891 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 MAP3K12Q12852 859 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 EIF4A2Q14240 407 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 LLGL1Q15334 1064 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 UBE3CQ15386 1083 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZNF124Q15973 351 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 MINDY4Q4G0A6 757 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 MUM1L1Q5H9M0 696 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 SULT6B1Q6IMI4 303 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 Q6ZVL8 140 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 CXXC5Q7LFL8 322 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 SAPCD2Q86UD0 394 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 GLB1L2Q8IW92 636 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 RTKN2Q8IZC4 609 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 TP53I13Q8NBR0 393 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 TXNDC5Q8NBS9 432 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 OR14K1Q8NGZ2 314 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 SLC35G2Q8TBE7 412 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 DIS3LQ8TF46 1054 aaKnown RBP3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 FATE1Q969F0 183 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 CCDC136Q96JN2 1154 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 AIFM3Q96NN9 605 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 WRNIP1Q96S55 665 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADI1Q9BV57 179 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 GREM2Q9H772 168 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 PCDH18Q9HCL0 1135 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 TLR9Q9NR96 1032 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 ING3Q9NXR8 418 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 FAM50BQ9Y247 325 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZDHHC9Q9Y397 364 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 MAP3K19Q56UN5 1328 aa3.34□□□□□ -1.87
CKS1BP7-201ENST00000522230 NSD2O96028 1365 aa3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 TMEM94Q12767 1356 aa3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 NINLQ9Y2I6 1382 aa3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 SETD1BQ9UPS6 1966 aaKnown RBP3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 CPSF1Q10570 1443 aaKnown RBP3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 PTCH1Q13635 1447 aa3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 COL3A1P02461 1466 aaPredicted RBP3.34□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF142P52746 1687 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MAP2P11137 1827 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GOLGA6CA6NDK9 693 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GOLGA6BA6NDN3 693 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 NRP2O60462 931 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CTNND1O60716 968 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MAFO75444 373 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CYP1A1P04798 512 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ALDH2P05091 517 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GOLGA6DP0CG33 693 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 MED14OSP0DP75 135 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 SYN1P17600 705 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 CSF2RBP32927 897 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 ETV4P43268 484 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 SLC6A9P48067 706 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 SARSP49591 514 aaKnown RBP3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 GPR15P49685 360 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 SLC16A1P53985 500 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 NRG3P56975 720 aa3.33□□□□□ -1.88
CKS1BP7-201ENST00000522230 LINC00310P59036 64 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms