RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 HSP90AA4PQ58FG1 418 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 ALKAL1Q6UXT8 129 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 GAS2L3Q86XJ1 694 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 FAM212AQ96EL1 285 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 BORCS6Q96GS4 357 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 SNX27Q96L92 541 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 UBN1Q9NPG3 1134 aa26.25■■□□□ 1.79
PVT1-212ENST00000521951 TOPORSQ9NS56 1045 aaPredicted RBP26.25■■□□□ 1.79
PVT1-212ENST00000521951 GNA14O95837 355 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 FGFR1P11362 822 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 CCDC40Q4G0X9 1142 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 C9orf50Q5SZB4 431 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 GAD1Q99259 594 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 HSD3B7Q9H2F3 369 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 PLEKHA5Q9HAU0 1116 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 PDE11AQ9HCR9 933 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 RALGAPA2Q2PPJ7 1873 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 OFD1O75665 1012 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 PSMD6Q15008 389 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 XKR4Q5GH76 650 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 CLLU1OSQ5K130 101 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 RASIP1Q5U651 963 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 CDKAL1Q5VV42 579 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 FRMD5Q7Z6J6 570 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 PLEKHO2Q8TD55 490 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 CNOT6LQ96LI5 555 aaKnown RBP26.24■■□□□ 1.79
PVT1-212ENST00000521951 ZFP42Q96MM3 310 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 UBE2OQ9C0C9 1292 aaKnown RBP26.24■■□□□ 1.79
PVT1-212ENST00000521951 MTIF3Q9H2K0 278 aaKnown RBP26.24■■□□□ 1.79
PVT1-212ENST00000521951 SLC4A7Q9Y6M7 1214 aa26.24■■□□□ 1.79
PVT1-212ENST00000521951 ARL5CA6NH57 179 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 TULP1O00294 542 aaPredicted RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 IL18RAPO95256 599 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 MLH1P40692 756 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 MARSP56192 900 aaKnown RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 PPP2R3AQ06190 1150 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 SHHQ15465 462 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 INTS8Q75QN2 995 aaKnown RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 TMCO2Q7Z6W1 182 aaPredicted RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 FAM114A1Q8IWE2 563 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 RNF214Q8ND24 703 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 HELQQ8TDG4 1101 aa26.23■■□□□ 1.79
PVT1-212ENST00000521951 METTL14Q9HCE5 456 aaKnown RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 ARMCX3Q9UH62 379 aaPredicted RBP26.23■■□□□ 1.79
PVT1-212ENST00000521951 KRT13P13646 458 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 AFF1P51825 1210 aaKnown RBP26.22■■□□□ 1.79
PVT1-212ENST00000521951 GLB1LQ6UWU2 654 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 CREBRFQ8IUR6 639 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 CD302Q8IX05 232 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 GSTCDQ8NEC7 633 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 PARD3BQ8TEW8 1205 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 CCDC127Q96BQ5 260 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 ASB7Q9H672 318 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 MIOSQ9NXC5 875 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 CNTN3Q9P232 1028 aa26.22■■□□□ 1.79
PVT1-212ENST00000521951 HOXA2O43364 376 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 GATMP50440 423 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 MCCD1P59942 119 aaPredicted RBP26.21■■□□□ 1.79
PVT1-212ENST00000521951 BFSP1Q12934 665 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 SURF1Q15526 300 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 FAM117BQ6P1L5 589 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 TMC2Q8TDI7 906 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 MAGEC2Q9UBF1 373 aaPredicted RBP26.21■■□□□ 1.79
PVT1-212ENST00000521951 INPP5FQ9Y2H2 1132 aa26.21■■□□□ 1.79
PVT1-212ENST00000521951 PDCD11Q14690 1871 aaKnown RBP26.21■■□□□ 1.79
PVT1-212ENST00000521951 FNDC1Q4ZHG4 1894 aaPredicted RBP26.2■■□□□ 1.79
PVT1-212ENST00000521951 SMIM28A0A1B0GU29 152 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 KCNJ18B7U540 433 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 PTGESO14684 152 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 INPPL1O15357 1258 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 KCNE1P15382 129 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 ZNF18P17022 549 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 VAMP7P51809 220 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 DLG4P78352 724 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 SPAG1Q07617 926 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 KCNJ12Q14500 433 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 ZMAT2Q96NC0 199 aaKnown RBP26.2■■□□□ 1.79
PVT1-212ENST00000521951 CASD1Q96PB1 797 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 FNBP1Q96RU3 617 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 RPS6KC1Q96S38 1066 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 SLC9A7Q96T83 725 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 POP1Q99575 1024 aaKnown RBP26.2■■□□□ 1.79
PVT1-212ENST00000521951 RBSNQ9H1K0 784 aa26.2■■□□□ 1.79
PVT1-212ENST00000521951 GOLGA6L19H0YKK7 550 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 DGKIO75912 1065 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 DLATP10515 647 aaKnown RBP26.19■■□□□ 1.78
PVT1-212ENST00000521951 SCNN1GP51170 649 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 TCP11X2Q5H9J9 407 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 GLRA4Q5JXX5 417 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 C1orf220Q5T0J3 134 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 JADE1Q6IE81 842 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 TRIM59Q8IWR1 403 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 ABI1Q8IZP0 508 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 PHOSPHO2Q8TCD6 241 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 RNPC3Q96LT9 517 aaKnown RBP26.19■■□□□ 1.78
PVT1-212ENST00000521951 TMEM117Q9H0C3 514 aa26.19■■□□□ 1.78
PVT1-212ENST00000521951 TDRD15B5MCY1 1934 aaKnown RBP26.19■■□□□ 1.78
PVT1-212ENST00000521951 LRRIQ3A6PVS8 624 aaPredicted RBP26.19■■□□□ 1.78
PVT1-212ENST00000521951 EEF1GP26641 437 aaKnown RBP26.19■■□□□ 1.78
PVT1-212ENST00000521951 ENPEPQ07075 957 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms