RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 EDN1P05305 212 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 GLULP15104 373 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 TIMP2P16035 220 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 RPL17P18621 184 aaKnown RBP12.36□□□□□ -0.43
CSMD1-210ENST00000521646 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
CSMD1-210ENST00000521646 KLRC2P26717 231 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 QARSP47897 775 aaKnown RBP12.36□□□□□ -0.43
CSMD1-210ENST00000521646 CLCN5P51795 746 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
CSMD1-210ENST00000521646 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
CSMD1-210ENST00000521646 TDGQ13569 410 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 EMC2Q15006 297 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 TRIM46Q7Z4K8 759 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 SIX5Q8N196 739 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 CEP250Q9BV73 2442 aa12.36□□□□□ -0.43
CSMD1-210ENST00000521646 MTCL1Q9Y4B5 1905 aaKnown RBP12.35□□□□□ -0.43
CSMD1-210ENST00000521646 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 LRRN2O75325 713 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 ZIC2O95409 532 aaPredicted RBP12.35□□□□□ -0.43
CSMD1-210ENST00000521646 DEXIO95424 95 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
CSMD1-210ENST00000521646 RAB27AP51159 221 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 PTK2Q05397 1052 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 CAPSQ13938 189 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 NONOQ15233 471 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSMD1-210ENST00000521646 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 CCDC149Q6ZUS6 474 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 WDR6Q9NNW5 1121 aaKnown RBP12.35□□□□□ -0.43
CSMD1-210ENST00000521646 CHST7Q9NS84 486 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 DLGAP2Q9P1A6 1054 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 CACNA1IQ9P0X4 2223 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 NCOR2Q9Y618 2525 aa12.35□□□□□ -0.43
CSMD1-210ENST00000521646 FANCMQ8IYD8 2048 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 ADAM12O43184 909 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 SLITRK3O94933 977 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 LARGE1O95461 756 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 ARF4P18085 180 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 AKAP5P24588 427 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 DNM2P50570 870 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 AK2P54819 239 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 PTENP60484 403 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 NTHL1P78549 312 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 DSG1Q02413 1049 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 C15orf39Q6ZRI6 1047 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 SRGAP1Q7Z6B7 1085 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 SLC44A3Q8N4M1 653 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 ZNF274Q96GC6 653 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-210ENST00000521646 APOL6Q9BWW8 343 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 GPRC5CQ9NQ84 441 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 CLUHO75153 1309 aa12.34□□□□□ -0.43
CSMD1-210ENST00000521646 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 TGM5O43548 720 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 ALDH2P05091 517 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
CSMD1-210ENST00000521646 SKIP12755 728 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 GLRA2P23416 452 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 FSHRP23945 695 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 OR1G1P47890 313 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 CDC42EP1Q00587 391 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 GIT2Q14161 759 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 EPHA7Q15375 998 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 RTP2Q5QGT7 225 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 PPP4R3AQ6IN85 833 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 KRT25Q7Z3Z0 450 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-210ENST00000521646 GPR152Q8TDT2 470 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 RIN2Q8WYP3 895 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-210ENST00000521646 ITPKCQ96DU7 683 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
CSMD1-210ENST00000521646 KLF16Q9BXK1 252 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms