RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 BICD1Q96G01 975 aa23.96■■□□□ 1.43
PTP4A3-204ENST00000521578 TARS2Q9BW92 718 aaKnown RBP23.96■■□□□ 1.43
PTP4A3-204ENST00000521578 IRX2Q9BZI1 471 aaPredicted RBP23.96■■□□□ 1.43
PTP4A3-204ENST00000521578 MRFAP1Q9Y605 127 aa23.96■■□□□ 1.43
PTP4A3-204ENST00000521578 EIF3DO15371 548 aaKnown RBP eCLIP23.95■■□□□ 1.423e-6■□□□□ 9
PTP4A3-204ENST00000521578 ABCD1P33897 745 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 MAGEA10P43363 369 aaPredicted RBP23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 KRT83P78385 493 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 MLLT1Q03111 559 aaPredicted RBP23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 KNOP1Q1ED39 458 aaKnown RBP23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 CCDC40Q4G0X9 1142 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 C16orf59Q7L2K0 433 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 MAP4K3Q8IVH8 894 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 TRIM59Q8IWR1 403 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 KCNN1Q92952 543 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 ACCSQ96QU6 501 aa23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 MRPL4Q9BYD3 311 aaKnown RBP23.95■■□□□ 1.42
PTP4A3-204ENST00000521578 CYLC1P35663 651 aaPredicted RBP23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 TUBB2AQ13885 445 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 CNKSR3Q6P9H4 555 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 APBB2Q92870 758 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 HVCN1Q96D96 273 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 TUBB2BQ9BVA1 445 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 PLAGL2Q9UPG8 496 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 CNTNAP2Q9UHC6 1331 aa23.94■■□□□ 1.42
PTP4A3-204ENST00000521578 UBE4BO95155 1302 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 EIF3CLB5ME19 914 aaKnown RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 PDXKO00764 312 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 MGEA5O60502 916 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 PFKMP08237 780 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ZSCAN20P17040 1043 aaPredicted RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 HOXD13P35453 343 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ADAM9Q13443 819 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 SYCP3Q8IZU3 236 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 LRRN4CLQ8ND94 238 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 EIF3CQ99613 913 aaKnown RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ACO2Q99798 780 aaKnown RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 HAUS4Q9H6D7 363 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 NHEJ1Q9H9Q4 299 aaPredicted RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 HNRNPDLO14979 420 aaKnown RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 CETN3O15182 167 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ZNF569Q5MCW4 686 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ATF7IP2Q5U623 682 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 TWF2Q6IBS0 349 aaKnown RBP23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ZNF365Q70YC5 407 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 ADAM2Q99965 735 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 MMRN2Q9H8L6 949 aa23.93■■□□□ 1.42
PTP4A3-204ENST00000521578 TISP43B9A030 160 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 EPHB6O15197 1021 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 TADA3O75528 432 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 LIG4P49917 911 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 KCNMA1Q12791 1236 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 ELF2Q15723 593 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 NOTUMQ6P988 496 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 OTOP2Q7RTS6 562 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 RTN4RL1Q86UN2 441 aaPredicted RBP23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 MNS1Q8NEH6 495 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 ZBTB45Q96K62 511 aaPredicted RBP23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 CARD6Q9BX69 1037 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 FTHL17Q9BXU8 183 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 CHST12Q9NRB3 414 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 EXOC7Q9UPT5 735 aa23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 V9GYY5 206 aaPredicted RBP23.92■■□□□ 1.42
PTP4A3-204ENST00000521578 RANBP2P49792 3224 aaKnown RBP23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 A0A1B0GUA9 196 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 EFCAB8A8MWE9 144 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 CALUO43852 315 aaPredicted RBP23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 IBSPP21815 317 aaPredicted RBP23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 AXLP30530 894 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 IKBKEQ14164 716 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 DSC3Q14574 896 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 EEF1DP3Q658K8 133 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 LINC01599Q8WXQ3 324 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.426e-9■■■□□ 14.9
PTP4A3-204ENST00000521578 PDZD7Q9H5P4 517 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 TMEM206Q9H813 350 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 FAM207AQ9NSI2 230 aaPredicted RBP23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 ZMYM2Q9UBW7 1377 aa23.91■■□□□ 1.42
PTP4A3-204ENST00000521578 ANKRD63C9JTQ0 380 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 ABL1P00519 1130 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 FGBP02675 491 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 ERCC6LQ2NKX8 1250 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 TMEM240Q5SV17 173 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 ZPBP2Q6X784 338 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 FRMD5Q7Z6J6 570 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 NEK11Q8NG66 645 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 BAP1Q92560 729 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 TCHPQ9BT92 498 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 TYW1Q9NV66 732 aaKnown RBP23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 ANKFY1Q9P2R3 1169 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 SLC39A4Q6P5W5 647 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 PSRC1Q6PGN9 363 aaPredicted RBP23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 ZBTB33Q86T24 672 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 SLC35F6Q8N357 371 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 EIF2AQ9BY44 585 aaKnown RBP23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 TNFSF13BQ9Y275 285 aa23.9■■□□□ 1.42
PTP4A3-204ENST00000521578 CTAGE9A4FU28 777 aa23.89■■□□□ 1.41
PTP4A3-204ENST00000521578 ENPP3O14638 875 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms