RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MTSS1LQ765P7 747 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 DLGAP2Q9P1A6 1054 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 ARHGEF35A5YM69 484 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 MED24O75448 989 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 LARGE1O95461 756 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 DCNP07585 359 aaKnown RBP16.42■□□□□ 0.22
PRKDC-204ENST00000521331 CYP11B2P19099 503 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 RPA1P27694 616 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 MCM7P33993 719 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 NAMPTP43490 491 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
PRKDC-204ENST00000521331 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
PRKDC-204ENST00000521331 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRKDC-204ENST00000521331 NAB2Q15742 525 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 DCAF4L1Q3SXM0 396 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 RTL10Q7L3V2 364 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 PJA1Q8NG27 643 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 DEPTORQ8TB45 409 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 CCDC113Q9H0I3 377 aa16.42■□□□□ 0.22
PRKDC-204ENST00000521331 TDRD15B5MCY1 1934 aaKnown RBP16.41■□□□□ 0.22
PRKDC-204ENST00000521331 DOCK8Q8NF50 2099 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 JAK2O60674 1132 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 MUTP22033 750 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 FOSBP53539 338 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 STARD6P59095 220 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 RAB33AQ14088 237 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 PADI6Q6TGC4 694 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
PRKDC-204ENST00000521331 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 BSNDQ8WZ55 320 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 FGF13Q92913 245 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 FGF14Q92915 247 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 POLIQ9UNA4 740 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 R4GN57 208 aa16.41■□□□□ 0.22
PRKDC-204ENST00000521331 CCL16O15467 120 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 LIG1P18858 919 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 FGFR3P22607 806 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 EFNA5P52803 228 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 GPC5P78333 572 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 NTHL1P78549 312 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
PRKDC-204ENST00000521331 HAUS3Q68CZ6 603 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 SLC7A14Q8TBB6 771 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 UROC1Q96N76 676 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
PRKDC-204ENST00000521331 MTRRQ9UBK8 725 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 KCNH3Q9ULD8 1083 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 GDAQ9Y2T3 454 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 ZNF292O60281 2723 aa16.4■□□□□ 0.22
PRKDC-204ENST00000521331 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 ADAM12O43184 909 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 B3GAT3O94766 335 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 SP9P0CG40 484 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 OR1D2P34982 312 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 PFKPQ01813 784 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 PRKCQQ04759 706 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 ST13P5Q8NFI4 369 aaPredicted RBP16.39■□□□□ 0.21
PRKDC-204ENST00000521331 KIFAP3Q92845 792 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 PPP1R10Q96QC0 940 aaKnown RBP16.39■□□□□ 0.21
PRKDC-204ENST00000521331 FOXQ1Q9C009 403 aa16.39■□□□□ 0.21
PRKDC-204ENST00000521331 KANSL1LA0AUZ9 987 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 EDN1P05305 212 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 NEK4P51957 841 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 MLF2Q15773 248 aaPredicted RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 PABPC1LQ4VXU2 614 aaKnown RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 EEF1DP3Q658K8 133 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 RSPO2Q6UXX9 243 aaPredicted RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 ANKS3Q6ZW76 656 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 ITFG1Q8TB96 612 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 BORCS6Q96GS4 357 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 DDX23Q9BUQ8 820 aaKnown RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 BCO2Q9BYV7 579 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 OSBPL6Q9BZF3 934 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 CXCL16Q9H2A7 254 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 USP20Q9Y2K6 914 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 BACE2Q9Y5Z0 518 aa16.38■□□□□ 0.21
PRKDC-204ENST00000521331 MTCL1Q9Y4B5 1905 aaKnown RBP16.38■□□□□ 0.21
PRKDC-204ENST00000521331 GLULP15104 373 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 MAGEA9P43362 315 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 ZNF174Q15697 407 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 SLC44A4Q53GD3 710 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 KIFC3Q9BVG8 833 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
PRKDC-204ENST00000521331 CDY1Q9Y6F8 540 aa16.37■□□□□ 0.21
PRKDC-204ENST00000521331 K7ERI5 159 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 CLCNKBP51801 687 aa16.36■□□□□ 0.21
PRKDC-204ENST00000521331 YARSP54577 528 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms