RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
EXTL3-208ENST00000520940 TNFSF13BQ9Y275 285 aa11.55□□□□□ -0.56
EXTL3-208ENST00000520940 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
EXTL3-208ENST00000520940 CCDC195A0A1B0GUA6 201 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 TGM5O43548 720 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 RFPL2O75678 378 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 C1RP00736 705 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 SPATA31D3P0C874 917 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 MYBP10242 640 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 RPL17P18621 184 aaKnown RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 GRM5P41594 1212 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 ELAVL2Q12926 359 aaKnown RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PSMD5Q16401 504 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 FAM171A1Q5VUB5 890 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 LARP1BQ659C4 914 aaKnown RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PRSS55Q6UWB4 352 aaPredicted RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 SPATA31D4Q6ZUB0 917 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PALB2Q86YC2 1186 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 CEP120Q8N960 986 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 ACSF2Q96CM8 615 aaPredicted RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 CDK5RAP3Q96JB5 506 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 CCDC94Q9BW85 323 aaPredicted RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 TARS2Q9BW92 718 aaKnown RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 SMOC2Q9H3U7 446 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PLEKHA4Q9H4M7 779 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 PTPRHQ9HD43 1115 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 RBM19Q9Y4C8 960 aaKnown RBP11.54□□□□□ -0.56
EXTL3-208ENST00000520940 CLUHO75153 1309 aa11.54□□□□□ -0.56
EXTL3-208ENST00000520940 TMEM189-UBE2V1I3L0A0 370 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 SLC16A4O15374 487 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 PAPLNO95428 1278 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 PLA2G4BP0C869 781 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 PLS3P13797 630 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 PROZP22891 400 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 YARSP54577 528 aaKnown RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 SLC12A3P55017 1021 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 VCPP55072 806 aaKnown RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 NHLH1Q02575 133 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 RAD51AP2Q09MP3 1159 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 LILRA6Q6PI73 481 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 MPZL3Q6UWV2 235 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 CEP57Q86XR8 500 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 SYT2Q8N9I0 419 aaPredicted RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 SMG7Q92540 1137 aaKnown RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 ZNF707Q96C28 371 aaPredicted RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 UROC1Q96N76 676 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 PLIN2Q99541 437 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 GOLGA2P5Q9HBQ8 144 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 WDR6Q9NNW5 1121 aaKnown RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
EXTL3-208ENST00000520940 ZDHHC7Q9NXF8 308 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 KCND2Q9NZV8 630 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 FBXW11Q9UKB1 542 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 NOTCH4Q99466 2003 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 USP34Q70CQ2 3546 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 ANK1P16157 1881 aa11.53□□□□□ -0.56
EXTL3-208ENST00000520940 MYO15AQ9UKN7 3530 aa11.52□□□□□ -0.56
EXTL3-208ENST00000520940 SMIM28A0A1B0GU29 152 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 SFI1A8K8P3 1242 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 ABLIM1O14639 778 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 SLC26A4O43511 780 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 N4BP1O75113 896 aaKnown RBP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 B3GAT3O94766 335 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 BMP15O95972 392 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 MCF2P10911 925 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 CLCNKBP51801 687 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 OSTNP61366 133 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 STRN3Q13033 797 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 NOLC1Q14978 699 aaKnown RBP eCLIP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 UPP1Q16831 310 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 IER5LQ5T953 404 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 BRAPQ7Z569 592 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 TMEM161BQ8NDZ6 487 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 PRSS33Q8NF86 280 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 LNX1Q8TBB1 728 aaPredicted RBP11.52□□□□□ -0.57
EXTL3-208ENST00000520940 SPIRE2Q8WWL2 714 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 STAMQ92783 540 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 SNX27Q96L92 541 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 AK8Q96MA6 479 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 CLSTN3Q9BQT9 956 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
EXTL3-208ENST00000520940 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
EXTL3-208ENST00000520940 NPHP3-ACAD11A0A0J9YXS1 232 aa11.51□□□□□ -0.57
EXTL3-208ENST00000520940 ADAM12O43184 909 aa11.51□□□□□ -0.57
EXTL3-208ENST00000520940 TOM1L1O75674 476 aa11.51□□□□□ -0.57
EXTL3-208ENST00000520940 ZMYND10O75800 440 aa11.51□□□□□ -0.57
EXTL3-208ENST00000520940 HARSP12081 509 aaKnown RBP11.51□□□□□ -0.57
EXTL3-208ENST00000520940 FGFR3P22607 806 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms