RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 AGAP9Q5VTM2 703 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 SMC1BQ8NDV3 1235 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 GPR101Q96P66 508 aaPredicted RBP5.87□□□□□ -1.47
CLK4-207ENST00000520909 DNAJC2Q99543 621 aaKnown RBP5.87□□□□□ -1.47
CLK4-207ENST00000520909 TMEM260Q9NX78 707 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 FRMD4BQ9Y2L6 1034 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 NOX1Q9Y5S8 564 aa5.87□□□□□ -1.47
CLK4-207ENST00000520909 FHAD1B1AJZ9 1412 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 SALL3Q9BXA9 1300 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 PJA2O43164 708 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 CTSSP25774 331 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 CRHR1P34998 444 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 FLT3LGP49771 235 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 MANFP55145 182 aaKnown RBP5.86□□□□□ -1.47
CLK4-207ENST00000520909 ZNF169Q14929 603 aaPredicted RBP5.86□□□□□ -1.47
CLK4-207ENST00000520909 MFSD14BQ5SR56 506 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 PRAMEF14Q5SWL7 426 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 ZNF362Q5T0B9 420 aaPredicted RBP5.86□□□□□ -1.47
CLK4-207ENST00000520909 CNNM4Q6P4Q7 775 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 LRRTM3Q86VH5 581 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 SLC41A1Q8IVJ1 513 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 MAPKAPK5Q8IW41 473 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 RHOT2Q8IXI1 618 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 TMEM132CQ8N3T6 1108 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 OR56A1Q8NGH5 318 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 ZNF384Q8TF68 577 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 PAWRQ96IZ0 340 aaKnown RBP5.86□□□□□ -1.47
CLK4-207ENST00000520909 Q96MF0 132 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 NEU1Q99519 415 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 MS4A5Q9H3V2 200 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLK4-207ENST00000520909 SPTLC3Q9NUV7 552 aa5.86□□□□□ -1.47
CLK4-207ENST00000520909 TMEM127O75204 238 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 RARRES1P49788 294 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 CLRN1P58418 232 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 TRIM25Q14258 630 aaKnown RBP5.85□□□□□ -1.47
CLK4-207ENST00000520909 TCEA2Q15560 299 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 FAM47AQ5JRC9 791 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 TSHZ3Q63HK5 1081 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 GPR149Q86SP6 731 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 C11orf74Q86VG3 221 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 ALOXE3Q9BYJ1 711 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 REXO4Q9GZR2 422 aaKnown RBP5.85□□□□□ -1.47
CLK4-207ENST00000520909 CDY2AQ9Y6F7 541 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 SNAPC4Q5SXM2 1469 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 CEP162Q5TB80 1403 aa5.85□□□□□ -1.47
CLK4-207ENST00000520909 RPTORQ8N122 1335 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 EIF4G3O43432 1585 aaKnown RBP5.84□□□□□ -1.47
CLK4-207ENST00000520909 MYADML2A6NDP7 307 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 PTPN7P35236 360 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 SIM1P81133 766 aaPredicted RBP5.84□□□□□ -1.47
CLK4-207ENST00000520909 NHLH1Q02575 133 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 SCAPQ12770 1279 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 Q6ZNX1 250 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 ARHGEF25Q86VW2 580 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 SLC35B2Q8TB61 432 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 ZNF480Q8WV37 535 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 SEMA4GQ9NTN9 838 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 KLHL11Q9NVR0 708 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 TBCCD1Q9NVR7 557 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 CUL7Q14999 1698 aa5.84□□□□□ -1.47
CLK4-207ENST00000520909 KDM1AO60341 852 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 PHF2O75151 1096 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 SNRPA1P09661 255 aaKnown RBP5.83□□□□□ -1.48
CLK4-207ENST00000520909 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
CLK4-207ENST00000520909 LSSP48449 732 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 PCBP1Q15365 356 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLK4-207ENST00000520909 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 MED25Q71SY5 747 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 AHI1Q8N157 1196 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 LRIT1Q9P2V4 623 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 NOC2LQ9Y3T9 749 aaKnown RBP5.83□□□□□ -1.48
CLK4-207ENST00000520909 MAGI1Q96QZ7 1491 aaPredicted RBP5.83□□□□□ -1.48
CLK4-207ENST00000520909 CLIP1P30622 1438 aa5.83□□□□□ -1.48
CLK4-207ENST00000520909 PBRM1Q86U86 1689 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 FAM83GA6ND36 823 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 MATN4O95460 622 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 ELANEP08246 267 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 ITGB6P18564 788 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 LGALS4P56470 323 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 IL2P60568 153 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 PITRM1Q5JRX3 1037 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 B3GNTL1Q67FW5 361 aaPredicted RBP5.82□□□□□ -1.48
CLK4-207ENST00000520909 BOD1Q96IK1 185 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 KCTD10Q9H3F6 313 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 PRDM12Q9H4Q4 367 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 CASS4Q9NQ75 786 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 CD2APQ9Y5K6 639 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 SETD1BQ9UPS6 1966 aaKnown RBP5.82□□□□□ -1.48
CLK4-207ENST00000520909 ADAMTS12P58397 1594 aa5.82□□□□□ -1.48
CLK4-207ENST00000520909 SYNJ2O15056 1496 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 A0A1B0GTW7 788 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 CXorf49A8MYA2 514 aaPredicted RBP5.81□□□□□ -1.48
CLK4-207ENST00000520909 RBMXL2O75526 392 aaKnown RBP5.81□□□□□ -1.48
CLK4-207ENST00000520909 FKBP9O95302 570 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 LPLP06858 475 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 CACNA2D1P54289 1103 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 FOXF2Q12947 444 aa5.81□□□□□ -1.48
CLK4-207ENST00000520909 RRP12Q5JTH9 1297 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms