RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 PLEKHG4BQ96PX9 1271 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 SPAG5Q96R06 1193 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 JMJD8Q96S16 334 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 CELF4Q9BZC1 486 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 EBF2Q9HAK2 575 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 KIF9Q9HAQ2 790 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 GOLGA6AQ9NYA3 693 aa7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 H2AFY2Q9P0M6 372 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 HOOK1Q9UJC3 728 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-225ENST00000520865 KDM6AO15550 1401 aaPredicted RBP7.27□□□□□ -1.24
CTNNA1-225ENST00000520865 DOT1LQ8TEK3 1739 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TCRBV5S4A2TA0A5A2 114 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 ENO4A6NNW6 628 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 FADS2P1A8MWK0 482 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 ALG1L2C9J202 215 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 MGRN1O60291 552 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 ATP2A2P16615 1042 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 GRK2P25098 689 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 GRK3P35626 688 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 FLT3P36888 993 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 DNM2P50570 870 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TMPRSS15P98073 1019 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 XRCC4Q13426 336 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 EIF4A2Q14240 407 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 LACTB2Q53H82 288 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 CCDC70Q6NSX1 233 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 MIS18BP1Q6P0N0 1132 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 SMIM5Q71RC9 77 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TMC6Q7Z403 805 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 SPRED2Q7Z698 418 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 DDX53Q86TM3 631 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TMEM151AQ8N4L1 468 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 NAT16Q8N8M0 369 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 ZNF526Q8TF50 670 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 RUFY2Q8WXA3 655 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 LINC01599Q8WXQ3 324 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TSR2Q969E8 191 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 HRASLS5Q96KN8 279 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 KCNJ15Q99712 375 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 RANBP17Q9H2T7 1088 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 CD248Q9HCU0 757 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 VTA1Q9NP79 307 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 CHPF2Q9P2E5 772 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 GULP1Q9UBP9 304 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 DDX20Q9UHI6 824 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 RCOR1Q9UKL0 485 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 BLOC1S6Q9UL45 172 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 TIMM13Q9Y5L4 95 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 MAP2P11137 1827 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 ATP10DQ9P241 1426 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 PCDH11XQ9BZA7 1347 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 PCDH11YQ9BZA8 1340 aa7.27□□□□□ -1.25
CTNNA1-225ENST00000520865 PALLDQ8WX93 1383 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 GOLGA6L10A0A0M3HER8 536 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 A0A1W2PQ27 194 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 A0A1W2PQ64 194 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 A0A1W2PQD8 194 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CTAGE9A4FU28 777 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 NDUFAB1O14561 156 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CCDC175P0C221 793 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 PSMA5P28066 241 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 PAPOLAP51003 745 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 PRKCQQ04759 706 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 DEUP1Q05D60 604 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 LSAMPQ13449 338 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 LAMB3Q13751 1172 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 LRRC23Q53EV4 343 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CMPK2Q5EBM0 449 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 NUGGCQ68CJ6 796 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ZNF574Q6ZN55 896 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ARHGAP22Q7Z5H3 698 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 SLCO6A1Q86UG4 719 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 SESTD1Q86VW0 696 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 GALNT15Q8N3T1 639 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ARFGAP2Q8N6H7 521 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 OR2W6PQ8NHA6 318 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CFAP61Q8NHU2 1237 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 HDAC7Q8WUI4 952 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 NUP133Q8WUM0 1156 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CHTF18Q8WVB6 975 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ZNF396Q96N95 335 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 AGAP3Q96P47 875 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ALG1Q9BT22 464 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 ADAMTS10Q9H324 1103 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 IFT22Q9H7X7 185 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CARS2Q9HA77 564 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 SLC40A1Q9NP59 571 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 HYPKQ9NX55 129 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 SLC5A4Q9NY91 659 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 B4GALT6Q9UBX8 382 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 HPCAL4Q9UM19 191 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CYP46A1Q9Y6A2 500 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 TCHHQ07283 1943 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 CHD4Q14839 1912 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 UBN2Q6ZU65 1347 aa7.26□□□□□ -1.25
CTNNA1-225ENST00000520865 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms