RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SQORQ9Y6N5 450 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 MROH7Q68CQ1 1323 aa9.25□□□□□ -0.93
VAPB-206ENST00000520497 A0A1W2PQJ5 194 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 SOX1O00570 391 aaPredicted RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 MEFVO15553 781 aaPredicted RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 STX10O60499 249 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 N4BP1O75113 896 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 RPS6KA5O75582 802 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 NOL4O94818 638 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 CLTAP09496 248 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 CKBP12277 381 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 SKILP12757 684 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 GTF2H1P32780 548 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 GRM5P41594 1212 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 KCNJ6P48051 423 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 MXI1P50539 228 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 MYL7Q01449 175 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 ARID5BQ14865 1188 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 EPC2Q52LR7 807 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 SEZ6Q53EL9 994 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 UBXN11Q5T124 520 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 SLC39A5Q6ZMH5 540 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 GBP6Q6ZN66 633 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 ANKRD33Q7Z3H0 272 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 APBB1IPQ7Z5R6 666 aaPredicted RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 TMEM192Q8IY95 271 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 TC2NQ8N9U0 490 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 LMO3Q8TAP4 145 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 CCDC127Q96BQ5 260 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 PHF12Q96QT6 1004 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 CGRRF1Q99675 332 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 ADPGKQ9BRR6 497 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 EIF2AQ9BY44 585 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 TMEM117Q9H0C3 514 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 GANQ9H2C0 597 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 PRO3102Q9H379 93 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 TMEM8AQ9HCN3 771 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 PDE11AQ9HCR9 933 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 PLCB1Q9NQ66 1216 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 TOPORSQ9NS56 1045 aaPredicted RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 ZNHIT6Q9NWK9 470 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 PIN4Q9Y237 131 aaKnown RBP9.24□□□□□ -0.93
VAPB-206ENST00000520497 COQ4Q9Y3A0 265 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 PTPRJQ12913 1337 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 TSC2P49815 1807 aa9.24□□□□□ -0.93
VAPB-206ENST00000520497 TTC26A0AVF1 554 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 RNF225M0QZC1 329 aaPredicted RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 EPHB6O15197 1021 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 MFAP3LO75121 409 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 NPTXRO95502 500 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 STAG3L1P0CL83 205 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 CXCL8P10145 99 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 DLATP10515 647 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 TRIM21P19474 475 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 PON1P27169 355 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 CASP14P31944 242 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 GCLMP48507 274 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 NCBP1Q09161 790 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 LPIN1Q14693 890 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 MBTPS1Q14703 1052 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 SURF1Q15526 300 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 EXOC3L4Q17RC7 722 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 ZACNQ401N2 412 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 KRT39Q6A163 491 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 TRIM65Q6PJ69 517 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 WDR49Q8IV35 697 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 THNSL1Q8IYQ7 743 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 USP38Q8NB14 1042 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 CACTINQ8WUQ7 758 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 ZNF516Q92618 1163 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 TOX2Q96NM4 488 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 PANX2Q96RD6 677 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 FNBP1Q96RU3 617 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 POP1Q99575 1024 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 CRACR2AQ9BSW2 395 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 EDEM3Q9BZQ6 932 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 KCNF1Q9H3M0 494 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 AGO3Q9H9G7 860 aaKnown RBP9.23□□□□□ -0.93
VAPB-206ENST00000520497 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 CHST12Q9NRB3 414 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 GCNT4Q9P109 453 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 ST3GAL5Q9UNP4 418 aa9.23□□□□□ -0.93
VAPB-206ENST00000520497 GOLGA6L9A6NEM1 432 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 RBAK-RBAKDNI3L0D1 243 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 GPR182O15218 404 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 TLR3O15455 904 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 ARHGAP6O43182 974 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 ZSCAN12O43309 604 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 IL18RAPO95256 599 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 C4BPAP04003 597 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 GHRP10912 638 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 SELPP16109 830 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms