RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 LARP1BQ659C4 914 aaKnown RBP27.81■■■□□ 2.04
VEGFA-220ENST00000519767 DCLRE1AQ6PJP8 1040 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 SPATA31D4Q6ZUB0 917 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 KCNK18Q7Z418 384 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 PIK3R5Q8WYR1 880 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 UROC1Q96N76 676 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 TBC1D32Q96NH3 1257 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 CCDC94Q9BW85 323 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-220ENST00000519767 PTPRHQ9HD43 1115 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 VWA3AA6NCI4 1184 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 ASGR2P07307 311 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 GRM5P41594 1212 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 SMTNP53814 917 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 NHLH1Q02575 133 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 RTP2Q5QGT7 225 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 SYT2Q8N9I0 419 aaPredicted RBP27.8■■■□□ 2.04
VEGFA-220ENST00000519767 FEZF2Q8TBJ5 459 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 SPIRE2Q8WWL2 714 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 SMG7Q92540 1137 aaKnown RBP27.8■■■□□ 2.04
VEGFA-220ENST00000519767 CDK5RAP3Q96JB5 506 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 PPP1R10Q96QC0 940 aaKnown RBP27.8■■■□□ 2.04
VEGFA-220ENST00000519767 TCHPQ9BT92 498 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 CXCL16Q9H2A7 254 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 CACNG4Q9UBN1 327 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 MYO10Q9HD67 2058 aa27.8■■■□□ 2.04
VEGFA-220ENST00000519767 TMEM189-UBE2V1I3L0A0 370 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 RFPL2O75678 378 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 MCF2P10911 925 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 AVPR2P30518 371 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 NUBP1P53384 320 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 MAPK7Q13164 816 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 PRSS55Q6UWB4 352 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-220ENST00000519767 CEP57Q86XR8 500 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 LNX1Q8TBB1 728 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-220ENST00000519767 HASPINQ8TF76 798 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 AK8Q96MA6 479 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 PRKD2Q9BZL6 878 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 PIDD1Q9HB75 910 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 IGSF9Q9P2J2 1179 aa27.79■■■□□ 2.04
VEGFA-220ENST00000519767 SMIM28A0A1B0GU29 152 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 TRAPPC3O43617 180 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 RPL17P18621 184 aaKnown RBP27.78■■■□□ 2.04
VEGFA-220ENST00000519767 TDGQ13569 410 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 XKR4Q5GH76 650 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 IER5LQ5T953 404 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 ALKAL1Q6UXT8 129 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 ZNF707Q96C28 371 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-220ENST00000519767 DDX27Q96GQ7 796 aaKnown RBP27.78■■■□□ 2.04
VEGFA-220ENST00000519767 PNMA5Q96PV4 448 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 CLSTN3Q9BQT9 956 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 TARS2Q9BW92 718 aaKnown RBP27.78■■■□□ 2.04
VEGFA-220ENST00000519767 SLC38A7Q9NVC3 462 aa27.78■■■□□ 2.04
VEGFA-220ENST00000519767 SFI1A8K8P3 1242 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 ZMYND10O75800 440 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 B3GAT3O94766 335 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 BMP15O95972 392 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 PLS3P13797 630 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 PTPN5P54829 565 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 STRN3Q13033 797 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 PSMD5Q16401 504 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 ZNF568Q3ZCX4 644 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-220ENST00000519767 TAS1R3Q7RTX0 852 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 GLYCTKQ8IVS8 523 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 ACAP3Q96P50 834 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 CDT1Q9H211 546 aa27.77■■■□□ 2.04
VEGFA-220ENST00000519767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.77■■■□□ 2.044e-7■■■■■ 28.5
VEGFA-220ENST00000519767 CLUHO75153 1309 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 SLC16A4O15374 487 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 PLA2G4BP0C869 781 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 MYBP10242 640 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 PROZP22891 400 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 UPP1Q16831 310 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 KCNK12Q9HB15 430 aa27.76■■■□□ 2.03
VEGFA-220ENST00000519767 H0YCG3 227 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 FGFR3P22607 806 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 GBP2P32456 591 aaPredicted RBP27.75■■■□□ 2.03
VEGFA-220ENST00000519767 CLCNKBP51801 687 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 SLC12A3P55017 1021 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 GLRA4Q5JXX5 417 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 MPZL3Q6UWV2 235 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 BRAPQ7Z569 592 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 NXPE3Q969Y0 559 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 PLIN2Q99541 437 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 IRF2BPLQ9H1B7 796 aa27.75■■■□□ 2.03
VEGFA-220ENST00000519767 TOM1L1O75674 476 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 HNRNPA1P09651 372 aaKnown RBP eCLIP27.74■■■□□ 2.03
VEGFA-220ENST00000519767 KCNE1P15382 129 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 UBA7P41226 1012 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 OSTNP61366 133 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 TMEM119Q4V9L6 283 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 LIN9Q5TKA1 542 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 RTL10Q7L3V2 364 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 TMEM161BQ8NDZ6 487 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 CALML4Q96GE6 196 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 LARSQ9P2J5 1176 aaKnown RBP27.74■■■□□ 2.03
VEGFA-220ENST00000519767 EPS15L1Q9UBC2 864 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 FBXW11Q9UKB1 542 aa27.74■■■□□ 2.03
VEGFA-220ENST00000519767 SCP2P22307 547 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 VCPP55072 806 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms