RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 MEIS3P2A8K0S8 358 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SPECC1L-ADORA2AF8WAN1 911 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 B4GALT3O60512 393 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CSDE1O75534 798 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 C1QL1O75973 258 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 FOSP01100 380 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 OATP04181 439 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 RPL17P18621 184 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 ATP4AP20648 1035 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 FCARP24071 287 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SMARCA1P28370 1054 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CTHP32929 405 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 PXNP49023 591 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 GNAQP50148 359 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 AMPD2Q01433 879 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 DSC1Q08554 894 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SPIRE1Q08AE8 756 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 GRSF1Q12849 480 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SEMA3BQ13214 749 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 ITGB3BPQ13352 177 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CCINQ13939 588 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 RAB33AQ14088 237 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 MAPK6Q16659 721 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 USP39Q53GS9 565 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 FAM78AQ5JUQ0 283 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CCNI2Q6ZMN8 369 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 NIPA1Q7RTP0 329 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CATIPQ7Z7H3 387 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CEP57Q86XR8 500 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 ZNF843Q8N446 348 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 LEMD2Q8NC56 503 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CTCFLQ8NI51 663 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 ADAMTS14Q8WXS8 1223 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CLSTN3Q9BQT9 956 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 FDXACB1Q9BRP7 624 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SPZ1Q9BXG8 430 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 GPR62Q9BZJ7 368 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 TRPV4Q9HBA0 871 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 RTN4Q9NQC3 1192 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 RRAGDQ9NQL2 400 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 HCFC1R1Q9NWW0 138 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 GABBR1Q9UBS5 961 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SEPT9Q9UHD8 586 aaPredicted RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 GIT1Q9Y2X7 761 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 FREM2Q5SZK8 3169 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SALL3Q9BXA9 1300 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 HEPACAM2A8MVW5 462 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 WDR64B1ANS9 1081 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 IPO5O00410 1097 aaKnown RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MEIS1O00470 390 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 DPYSL4O14531 572 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PRRG1O14668 218 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 EXTL3O43909 919 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 TRAK2O60296 914 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 OPHN1O60890 802 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 APBB3O95704 486 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CCNE2O96020 404 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PRKCSHP14314 528 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CEBPBP17676 345 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MX1P20591 662 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MLH1P40692 756 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MAPK8P45983 427 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 AFF1P51825 1210 aaKnown RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 IRX4P78413 519 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PLCB2Q00722 1185 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CFHR1Q03591 330 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 HSP90AA2PQ14568 343 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PON2Q15165 354 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PCBP1Q15365 356 aaKnown RBP eCLIP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 SEC23AQ15436 765 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 SLC5A9Q2M3M2 681 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 FBXO43Q4G163 708 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 ARHGAP29Q52LW3 1261 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 TRIM61Q5EBN2 209 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 RTP2Q5QGT7 225 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 FAM171A1Q5VUB5 890 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PMS2CLQ68D20 193 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PRSS55Q6UWB4 352 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 LRRC69Q6ZNQ3 347 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 RABEPKQ7Z6M1 372 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 PIP4P1Q86T03 277 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 RHPN2Q8IUC4 686 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 EXOC8Q8IYI6 725 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CCDC26Q8TAB7 109 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MDM1Q8TC05 714 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 ACDQ96AP0 544 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CCDC51Q96ER9 411 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 B3GALT6Q96L58 329 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 NLRP4Q96MN2 994 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 MAP3K14Q99558 947 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 CORO1BQ9BR76 489 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 TRIM6Q9C030 488 aaPredicted RBP5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 SLITRK6Q9H5Y7 841 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 EBF1Q9UH73 591 aa5.51□□□□□ -1.53
AC055854.1-202ENST00000519624 GREB1Q4ZG55 1949 aa5.5□□□□□ -1.53
AC055854.1-202ENST00000519624 MYH15Q9Y2K3 1946 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms